Protein Alignment vnd and barhl1

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: XP_004916717.1
• Gene: barhl1 / 100491447
• XenbaseID: XB-GENE-853661
• Length: 327
• Species: Xenopus tropicalis
• Alignment Length: 319
• Identity: 84/319 - (26%)
• Similarity: 120/319 - (37%)
• Gaps: 89/319 - (27%)

  Fly   388 TMLQHSGRSAWIKENE-LYGTQQPASPDSTSPVTSEVSYTYIGSNCQTSPALSGD---------- 441
            |:|.|...|..:.:.: |.|  :..||...|| :||||     |.|.:.|:...|
 Frog    11 TILSHRAGSPGLAQGDTLMG--ESRSPLELSP-SSEVS-----SVCSSPPSPDRDCLDGVAGRQG 67

  Fly   442 ----------------YKSYSRSADS-----DALSVGDALHTLHGSSGNGSAGGAPTAHALHNNN 485
                            ..|.||:..|     |.|:....|.|....|.||.    ||....|...
 Frog    68 VALAMESHLQPGVQLSAPSQSRTVTSSFLIRDILADCKPLATCAPYSSNGQ----PTHDLAHCLA 128

  Fly   486 NNTTNNNNHSL-KAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLP---NKKR 546
            :...::....| |:.....:.|.:...:.|:|..|              .::..|..|   .|.|
 Frog   129 SKAADDFRDKLDKSSSSTSSESEYKGKVKEEGDRE--------------ISSSRDSPPVRLKKPR 179

  Fly   547 KRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYE- 610
            |.|..||..|..:|||.|.:|:|||..:|..||:.:.||.||||.|:||.|.|.|| |...|.|
 Frog   180 KARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKR-QTAVGLEL 243

  Fly   611 ----GHPGLLHGHATHPH-HPSAL--------------------PSPRRVAVPVLVRNG 644
                |:...|......|: :|.:|                    |:.:|..||.::.:|
 Frog   244 LAEAGNYSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPTAPPPALQRPLVPRILIHG 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	28/55 (51%)
barhl1	XP_004916717.1	Homeodomain	179..235	CDD:459649	28/55 (51%)