Protein Alignment vnd and pdx1

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: XP_002934065.1
• Gene: pdx1 / 100490648
• XenbaseID: XB-GENE-483331
• Length: 271
• Species: Xenopus tropicalis
• Alignment Length: 136
• Identity: 46/136 - (33%)
• Similarity: 70/136 - (51%)
• Gaps: 18/136 - (13%)

  Fly   537 GSDGLPNKKRKR-RVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKT 600
            ||..:..::.|| |..:|:||..|||:.|...:|:|.|.|..||.::.||...:||||||.|.|.
 Frog   138 GSYIMEQEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKW 202

  Fly   601 KRAQNEKGYEGHPGLLHGHATHPHHPSALPSPRRVAVPVLVRNGKPCLGDSSKLGADCVSVSSAT 665
            |:.:::|         .|..:.|...|.:.|..      ::::...|||:|...| |.|. |||.
 Frog   203 KKEEDKK---------RGRGSDPEQDSVVSSAD------VIKDEPQCLGNSQNTG-DLVR-SSAL 250

  Fly   666 ATAMQN 671
            .|:.|:
 Frog   251 PTSPQS 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	26/56 (46%)
pdx1	XP_002934065.1	Homeodomain	148..204	CDD:459649	26/55 (47%)