Protein Alignment vnd and hoxc10

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001258236.1
• Gene: hoxc10 / 100487723
• XenbaseID: XB-GENE-486915
• Length: 351
• Species: Xenopus tropicalis
• Alignment Length: 230
• Identity: 67/230 - (29%)
• Similarity: 93/230 - (40%)
• Gaps: 41/230 - (17%)

  Fly   401 ENELYGTQQP--ASPDSTSPVTSEVSYTYIGSNCQTSPA--LSGDYKS-----YSRSADSDALSV 456
            |..||..|.|  .|.|...||.|....:. |.:.:.:|:  .:||:::     .|.||.|:.|..
 Frog   126 EAALYPNQMPETRSSDHEVPVPSYYRASQ-GYSMEKTPSCHTTGDFETTFENRTSVSARSEILEQ 189

  Fly   457 GDALHTLHGSSGNGSAGGAPTAHALHNNN---NNTTNN-------NNHSLKAEGINGAGSGHDDS 511
            ..|          |..||.|......|.:   |.||::       ...||.|..:..:....:.|
 Frog   190 QQA----------GGKGGFPENTKTDNQSLATNLTTSSATASDIKTEKSLPAPKLPPSEGDKEPS 244

  Fly   512 LNEDGIEEDIDDVDDADGSGGGDANGSDGLPN-----KKRKRRVLFTKAQTYELERRFRQQRYLS 571
            .|.|      ...|::|.....|....:...|     ..||:|..:||.||.|||:.|....||:
 Frog   245 KNTD------TSTDNSDAEAKEDIKAENAAGNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLT 303

  Fly   572 APEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNE 606
            ...|..::..|.||..||||||||.|.|.|:...|
 Frog   304 RERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRE 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	27/55 (49%)
hoxc10	NP_001258236.1	Homeodomain	278..334	CDD:459649	27/55 (49%)