Protein Alignment vnd and nkx3-3

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: XP_002937227.1
• Gene: nkx3-3 / 100485176
• XenbaseID: XB-GENE-479908
• Length: 241
• Species: Xenopus tropicalis
• Alignment Length: 240
• Identity: 81/240 - (33%)
• Similarity: 106/240 - (44%)
• Gaps: 58/240 - (24%)

  Fly   417 SPVTSEVSYTYIGSNCQTSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPTAHAL 481
            ||:||......:...|:                ||:.           |:.||| ..|..|..|.
 Frog     7 SPLTSFSIQDILARTCR----------------DSNG-----------GNEGNG-GNGDNTGKAK 43

  Fly   482 HNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDD-------VDDADGSG------GG 533
            ..:..::|  ..||..|||.|......:..|..:..:.|.|.       ..:|..:|      .|
 Frog    44 RTDEKSST--PPHSPSAEGHNDWPQADNPPLTPEKEKTDTDSGTEDSTWEPEAASTGAYTDPSSG 106

  Fly   534 DANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRY 598
            |..| |...:.|::.|..|:.||.|||||||..|||||.|||..||:.::||.|||||||||.||
 Frog   107 DLLG-DSPKSSKKRSRAAFSHAQVYELERRFSLQRYLSGPERADLAAALKLTETQVKIWFQNRRY 170

  Fly   599 KTKRAQNEKGYEGHPGLLHGHATHPHHPSALPSPRRVAVPVLVRN 643
            ||||.           |:   ||.....|:|...|:|||.|||::
 Frog   171 KTKRK-----------LI---ATQTAPKSSLAPARKVAVRVLVKD 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	36/55 (65%)
nkx3-3	XP_002937227.1	Homeodomain	118..174	CDD:459649	36/55 (65%)