Protein Alignment vnd and nkx2-5

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001116891.1
• Gene: nkx2-5 / 100144646
• XenbaseID: XB-GENE-487966
• Length: 300
• Species: Xenopus tropicalis
• Alignment Length: 109
• Identity: 65/109 - (59%)
• Similarity: 81/109 - (74%)
• Gaps: 15/109 - (13%)

  Fly   544 KKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKG 608
            |:||.||||::||.|||||||:||:|||||||:|||::::||.|||||||||.|||.||.:.::.
 Frog   124 KRRKPRVLFSQAQVYELERRFKQQKYLSAPERDHLANVLKLTSTQVKIWFQNRRYKCKRQRQDQT 188

  Fly   609 YEGHPGLLHGHATHPHHPSALPSPRRVAVPVLVRNGKPCLGDSS 652
            .|               ...||.|||:|||||||:||||||:||
 Frog   189 LE---------------MVGLPPPRRIAVPVLVRDGKPCLGESS 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	41/55 (75%)
nkx2-5	NP_001116891.1	Homeodomain	132..182	CDD:459649	36/49 (73%)
		COG5576	<133..235	CDD:227863	58/100 (58%)