Protein Alignment vnd and nkx2-1

DIOPT Version :9

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: XP_002935383.1
• Gene: nkx2-1 / 100135015
• XenbaseID: XB-GENE-485985
• Length: 346
• Species: Xenopus tropicalis
• Alignment Length: 345
• Identity: 120/345 - (34%)
• Similarity: 147/345 - (42%)
• Gaps: 88/345 - (25%)

  Fly   412 SPDSTSPVTSEVSYTYIGSNCQTSPALSGDYKSYSRSADSDA-----LS-------VGDALHTLH 464
            ||..|:|.:             .|..||...:||.:.|...|     ||       |..|....|
 Frog     4 SPKHTTPFS-------------VSDILSPLEESYKKVAMESAGLGAPLSAAYRQSQVSQASMQQH 55

  Fly   465 GSSGNG--------SAGGAP-TAHALHNN--NNNTTNNNNHS-----------LKAEGINGAG-- 505
            |...||        :|.|.| .:|.....  |.|..|..|.|           ..|.|..||.
 Frog    56 GMGHNGPVSAAYHMTAAGVPQLSHTTMGGYCNGNLGNLGNMSELPPYQDTMRNSSATGWYGANPD 120

  Fly   506 ---------SGHDDSLNEDGIEEDIDDVDDADGSGG--GDANGSDGLP---NKKRKRRVLFTKAQ 556
                     .|....:|..|:           |:.|  ||. |....|   ..:|||||||::||
 Frog   121 PRFSTISRFMGPSSGMNMGGL-----------GNMGSLGDV-GKSMTPLQATPRRKRRVLFSQAQ 173

  Fly   557 TYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHGHAT 621
            .|||||||:||:||||||||||||:|.||||||||||||||||.||...:|..:......:....
 Frog   174 VYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQQMQQDNSSCQ 238

  Fly   622 HPHHPSALPSPRRVAVPVLVRNGKPCLGDSSKLGADCVSVSSATATAMQNAAAHHLVALNGAAAY 686
            ...      |||||||||||::||||...|:...|...|....||||:       .|..||...:
 Frog   239 QQQ------SPRRVAVPVLVKDGKPCQAGSNTPTAALQSHQQQTATAI-------TVTSNGLGPH 290

  Fly   687 QHAAAAAAGLHAHAHAHAHA 706
            |.....:||.......|:::
 Frog   291 QSHQTNSAGQSPDLVPHSNS 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeobox	548..601	CDD:278475	45/52 (87%)
nkx2-1	XP_002935383.1	Homeobox	165..219	CDD:365835	45/53 (85%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X524
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910