Protein Alignment vnd and hoxb5

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001094494.1
• Gene: hoxb5 / 100113366
• XenbaseID: XB-GENE-1005991
• Length: 258
• Species: Xenopus tropicalis
• Alignment Length: 302
• Identity: 69/302 - (22%)
• Similarity: 101/302 - (33%)
• Gaps: 105/302 - (34%)

  Fly   335 SHAHANAAAAHLL-----ASHNAAAAAAVAAGQYLPNLPKNFPGSFGDEMSSYHHM------AQT 388
            |..:.|....|:|     :|.|.:.:...|||...|:       ::|   .:|:.|      |..
 Frog    10 SGRYPNGPDYHVLNYGTGSSSNLSGSYREAAGSMQPS-------AYG---YNYNGMDLSVSRAAA 64

  Fly   389 MLQHSGRSAWIKENELYGTQQP---ASPD-------------STSPVTSEVSYTYIGSNCQTSPA 437
            ...|.|.||:..:...:...|.   |:||             .|.|.||..|........:||.:
 Frog    65 SSSHYGDSAFPGQESRFRANQSCPLATPDPLPCAKSHKDELSPTDPATSAGSSAQFTEVEETSAS 129

  Fly   438 LSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGG-------APTAHALHNNNNNTTNNNNHS 495
            ...:..|..||:...        ..|..:|..|:||.       .|....||.|:
 Frog   130 SETEESSTPRSSAPP--------RALQENSSPGAAGTDGQNPQIFPWMRKLHINH---------- 176

  Fly   496 LKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYEL 560
                                                  |..|.||     ::.|..:|:.||.||
 Frog   177 --------------------------------------DMTGPDG-----KRARTAYTRYQTLEL 198

  Fly   561 ERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR 602
            |:.|...|||:...|..:|..:.|:..|:||||||.|.|.|:
 Frog   199 EKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	23/55 (42%)
hoxb5	NP_001094494.1	Homeodomain	184..240	CDD:459649	23/55 (42%)