DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and emx1l

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:XP_002936883.1 Gene:emx1l / 100101663 XenbaseID:XB-GENE-876649 Length:213 Species:Xenopus tropicalis


Alignment Length:81 Identity:33/81 - (40%)
Similarity:46/81 - (56%) Gaps:6/81 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   533 GDANGSD-----GLPNKKRKR-RVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKI 591
            |:.|..|     |..::|.|| |..|:.:|...||..|.:..|:...||:.||:.:.||.||||:
 Frog    97 GEENTPDNYLLHGPFSRKPKRIRTAFSPSQLLRLEGAFEKNHYVVGAERKQLANSLCLTETQVKV 161

  Fly   592 WFQNHRYKTKRAQNEK 607
            ||||.|.|.||.:.|:
 Frog   162 WFQNRRTKHKRQKLEE 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 25/56 (45%)
emx1lXP_002936883.1 Homeodomain 116..172 CDD:459649 25/55 (45%)

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