Protein Alignment vnd and hoxa2

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: XP_004915456.1
• Gene: hoxa2 / 100038099
• XenbaseID: XB-GENE-488087
• Length: 373
• Species: Xenopus tropicalis
• Alignment Length: 185
• Identity: 50/185 - (27%)
• Similarity: 72/185 - (38%)
• Gaps: 40/185 - (21%)

  Fly   433 QTSPALS-GDYKSYSRSADSDALSVGDALHTLHGSSGNGS----AGGAPTAHALHNNNNNTTNNN 492
            ||.|:|: |.:..:||..              |..:|:|.    ||..|..:........:....
 Frog    54 QTIPSLNPGSHPRHSRPK--------------HSPNGHGDSPVPAGSLPPEYPWMKEKKASKKAP 104

  Fly   493 NHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKRKRRVLFTKAQT 557
            ..:..|.....|.......|:...|      ::..|.|.||           .|:.|..:|..|.
 Frog   105 IAAATAAAAASAAPATTACLSHKEI------IEIQDNSSGG-----------SRRLRTAYTNTQL 152

  Fly   558 YELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR----AQNEKG 608
            .|||:.|...:||..|.|..:|:|:.||..|||:||||.|.|.||    .:|:.|
 Frog   153 LELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNG 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	25/55 (45%)
hoxa2	XP_004915456.1	Homeodomain	141..197	CDD:459649	25/55 (45%)