Protein Alignment vnd and nkx2-2

DIOPT Version :9

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: XP_002939477.1
• Gene: nkx2-2 / 100038077
• XenbaseID: XB-GENE-482219
• Length: 271
• Species: Xenopus tropicalis
• Alignment Length: 274
• Identity: 117/274 - (42%)
• Similarity: 137/274 - (50%)
• Gaps: 59/274 - (21%)

  Fly   436 PALSGDYKSYSRSADSDALSVGDALHTLHGSSGNG-----SAGGAPTAHALHNNNNN-------T 488
            |..:.|..|.:..||.|.    |.........|.|     :....|.....:::::|       |
 Frog    19 PDTNDDEGSIAEGADEDT----DGSEPTKKPRGLGQSPLETVQSLPLKSPFYDSSDNPYTRWLAT 79

  Fly   489 TNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKRKRRVLFT 553
            |.:..:||  .|...:.|..|.|........|....:|.|.|...|:       .|||||||||:
 Frog    80 TESIQYSL--HGFASSNSQQDSSPKSPEPSADESPDNDKDPSTNPDS-------GKKRKRRVLFS 135

  Fly   554 KAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHG 618
            ||||||||||||||||||||||||||||||||||||||||||||||.|||:.|||.|..|
 Frog   136 KAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAEKGMEVTP----- 195

  Fly   619 HATHPHHPSALPSPRRVAVPVLVRNGKPC-------LGDSSKLGADCVSVSSATATAMQ------ 670
                      ||||||||||||||:||||       |..:...|....:.|:.:...||
 Frog   196 ----------LPSPRRVAVPVLVRDGKPCHTLKAQDLAATFPAGIPFSAYSAQSLQHMQYNAQYS 250

  Fly   671 ---NA---AAHHLV 678
               ||   .|||||
 Frog   251 SASNAQYPTAHHLV 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeobox	548..601	CDD:278475	51/52 (98%)
nkx2-2	XP_002939477.1	LAP1C	21..>149	CDD:368520	44/140 (31%)
		COG5576	93..216	CDD:227863	89/144 (62%)
		Homeobox	130..184	CDD:365835	51/53 (96%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	115	1.000	Domainoid score	I5983
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1072653at2759
OrthoFinder	1	1.000	-	-		FOG0002404
OrthoInspector	1	1.000	-	-		oto103007
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2570
SonicParanoid	1	1.000	-	-		X524
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	6.040