DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and not

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_001164669.1 Gene:not / 100038059 XenbaseID:XB-GENE-478518 Length:236 Species:Xenopus tropicalis


Alignment Length:66 Identity:29/66 - (43%)
Similarity:41/66 - (62%) Gaps:0/66 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   542 PNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNE 606
            |.|.::.|.:||..|...||:.|.:|:|:...||..|||.:.||.||||:||||.|.|.::...|
 Frog   135 PCKMKRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQSLE 199

  Fly   607 K 607
            :
 Frog   200 Q 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 26/55 (47%)
notNP_001164669.1 Homeodomain 139..195 CDD:459649 26/55 (47%)

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