DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Appl and SPINT1

DIOPT Version :9

Sequence 1:NP_001245448.1 Gene:Appl / 31002 FlyBaseID:FBgn0000108 Length:890 Species:Drosophila melanogaster
Sequence 2:NP_001373802.1 Gene:SPINT1 / 6692 HGNCID:11246 Length:529 Species:Homo sapiens


Alignment Length:193 Identity:42/193 - (21%)
Similarity:62/193 - (32%) Gaps:71/193 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VTDLSKKTTGPTCLRDKMDLLDYCKKAYPN--RDIT-NIVESSHYQKIGGWC---RQGALNAAKC 116
            ||.||.|.|...||..  :.:..|:.::|.  .|.| .|.:|..|    |.|   :...|...:|
Human   238 VTVLSTKQTEDYCLAS--NKVGRCRGSFPRWYYDPTEQICKSFVY----GGCLGNKNNYLREEEC 296

  Fly   117 KGSHRWIK--PFR---------------------CLGPFQSDALLVPEGCLFDHIHNASRCWPFV 158
            ..:.|.::  |.|                     |.|..|........||..|         .|:
Human   297 ILACRGVQGGPLRGSSGAQATFPQGPSMERRHPVCSGTCQPTQFRCSNGCCID---------SFL 352

  Fly   159 RWNQT-------GAAACQERGMQMRSFAMLLPCGISVFSGVEFVCCPKHFKTDEIHVKKTDLP 214
            ..:.|       ..|||::.              .|.|..::.:    ||.:|:.|.  .|||
Human   353 ECDDTPNCPDASDEAACEKY--------------TSGFDELQRI----HFPSDKGHC--VDLP 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApplNP_001245448.1 A4_EXTRA 26..198 CDD:128326 35/175 (20%)
APP_N 33..141 CDD:280358 25/111 (23%)
APP_Cu_bd 143..198 CDD:289676 9/61 (15%)
APP_E2 387..580 CDD:289677
GBP_C <629..682 CDD:303769
APP_amyloid 834..887 CDD:287486
SPINT1NP_001373802.1 MANEC 50..139 CDD:400058
Kunitz_BPTI 249..301 CDD:394972 13/57 (23%)
LDLa 334..366 CDD:197566 6/40 (15%)
Kunitz_BPTI 391..442 CDD:394972 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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