DRSC/TRiP Functional Genomics Resources

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Protein Alignment Appl and tfpi2

DIOPT Version :9

Sequence 1:NP_001245448.1 Gene:Appl / 31002 FlyBaseID:FBgn0000108 Length:890 Species:Drosophila melanogaster
Sequence 2:NP_001035185.1 Gene:tfpi2 / 560339 ZFINID:ZDB-GENE-060503-38 Length:233 Species:Danio rerio


Alignment Length:131 Identity:26/131 - (19%)
Similarity:41/131 - (31%) Gaps:51/131 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PQIAVLCEAGQIYQPQYLSEEG-------RWVTDLSKKTTGP----TC------LRDKMDLLDYC 81
            |:|..:|        ::..:||       |:..:::.....|    .|      .|:..:.::||
Zfish    84 PKIPQIC--------RFQKKEGPCRGLFSRYFFNMTSMQCEPFTYGGCQGNENNFRNPEECIEYC 140

  Fly    82 K--KAYP-----NRD---------------ITNIVESSHYQKIGGWCRQGALNAAKCK---GSHR 121
            |  |..|     |.|               .|...|...|...|| .....::...|.   ||.|
Zfish   141 KPPKTIPVICLDNLDKGRCSASIPRYYYNSATKTCEEFMYTGCGG-SNNNFISKQSCVDVCGSKR 204

  Fly   122 W 122
            |
Zfish   205 W 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApplNP_001245448.1 A4_EXTRA 26..198 CDD:128326 26/131 (20%)
APP_N 33..141 CDD:280358 26/131 (20%)
APP_Cu_bd 143..198 CDD:289676
APP_E2 387..580 CDD:289677
GBP_C <629..682 CDD:303769
APP_amyloid 834..887 CDD:287486
tfpi2NP_001035185.1 KU 28..80 CDD:197529
Kunitz_BPTI 89..141 CDD:278443 8/59 (14%)
Kunitz_BPTI 149..201 CDD:278443 8/52 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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