DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Appl and Tfpi2

DIOPT Version :9

Sequence 1:NP_001245448.1 Gene:Appl / 31002 FlyBaseID:FBgn0000108 Length:890 Species:Drosophila melanogaster
Sequence 2:NP_001368837.1 Gene:Tfpi2 / 21789 MGIID:108543 Length:266 Species:Mus musculus


Alignment Length:72 Identity:13/72 - (18%)
Similarity:20/72 - (27%) Gaps:36/72 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 WDQSGGAKVVSLKSDSSSPSSAPVAPAPEKAPVKSESVTSTPQLSASAAAFVAANSGNSGTGAGA 387
            ||    ::|:.|...|:|..|....|..::..                                |
Mouse     4 WD----SRVLGLNLSSASNDSLSTWPGVQRTT--------------------------------A 32

  Fly   388 PPSTAQP 394
            ||:|..|
Mouse    33 PPNTMDP 39

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApplNP_001245448.1 A4_EXTRA 26..198 CDD:128326
APP_N 33..141 CDD:280358
APP_Cu_bd 143..198 CDD:289676
APP_E2 387..580 CDD:289677 5/8 (63%)
GBP_C <629..682 CDD:303769
APP_amyloid 834..887 CDD:287486
Tfpi2NP_001368837.1 KU 70..123 CDD:238057
Kunitz_BPTI 191..243 CDD:394972
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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