DRSC/TRiP Functional Genomics Resources

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Protein Alignment Appl and F22E12.1

DIOPT Version :9

Sequence 1:NP_001245448.1 Gene:Appl / 31002 FlyBaseID:FBgn0000108 Length:890 Species:Drosophila melanogaster
Sequence 2:NP_505684.2 Gene:F22E12.1 / 179460 WormBaseID:WBGene00009058 Length:763 Species:Caenorhabditis elegans


Alignment Length:583 Identity:101/583 - (17%)
Similarity:201/583 - (34%) Gaps:168/583 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 NAEYDSGE----EGDNYEEDGAGSESEAEVEASWDQSGGAKVVSLKSDSSSPSSAPVAPAPEKAP 354
            |:.|||..    ..||                 ||..  ...:::......||....|||     
 Worm   191 NSYYDSHPRRYGNSDN-----------------WDNK--LMTINISHRDDGPSYFHAAPA----- 231

  Fly   355 VKSESVTSTPQLSASAAAFVAANSGNSGTGAGAPPSTAQPTSDPYFTHFDPHYEHQSYKVSQ--- 416
                  .:.|..|.:|.:|.....|.:.....:.|...|....      |.:::.|....:|   
 Worm   232 ------VTVPMFSRAAQSFKTQADGLTIHRYDSEPRPMQVLDQ------DVNWQIQEQASAQQNG 284

  Fly   417 --KRLEESHREKVTRVMKDWSDLEEKYQDMRLADPKAAQSFKQRMTA--------RFQTSVQALE 471
              ||..:..::|:...|            :.|....|:||...|:..        |..|.....|
 Worm   285 FMKRRFKMQKKKLPPRM------------IHLGTRPASQSNSYRIQLDSEINEHNRPVTYQVVRE 337

  Fly   472 EEGNAEKHQLAAMHQQRVLAHINQRKREAM--TCYTQALTEQPP-------------------NA 515
            ::.:.::|...:...|.......:|.::.|  ..:.||..::||                   |.
 Worm   338 QDAHVQQHNQISQSLQNEAEETQRRIQDTMRRNYFEQARYQRPPVQMPPPPPPPQQNSPSVNENY 402

  Fly   516 H---------HV---EKCLQKLLRALHKDRAHALAHYRHLLNSGGPGG-------LEAAASERPR 561
            |         |:   ||.|::.|.|...|  |.:....|:.....|.|       ::..|..:..
 Worm   403 HPELVNQFKSHLDEHEKALRRKLEAQFPD--HIITLIPHIETVRNPDGSNVVRQRIKWTAYPKGA 465

  Fly   562 TLERLIDIDRAVNQSMTMLKRYPELSAKIAQLM---------NDYILALRSKDDIPGSSLGMSEE 617
            .:...:.:     ..:..|...|.:...|..::         ..||..:.:   :|...:...:.
 Worm   466 RIPEHVPV-----PPVAQLPPLPPMQQVIQPILTTQAVYTTEEPYIPLITT---VPTHEISRLKH 522

  Fly   618 AEAGILDKYRVEIERKVAEKER-----------LRLAEKQRKEQRAAEREKLREEKLRLEAKKVD 671
            .|  :..||:.::|::..|::|           |:.|:::.:|:...||||...:: ||   |.:
 Worm   523 EE--MQRKYKEDLEKRQEEQKRQQEEHKKKIQELKAAQQRERERMMVEREKAENDR-RL---KYE 581

  Fly   672 DMLKSQVAEQQSQ------PTQSSTQSQAQQ--QQQEKSLPGKELGPDAALVTAANPNLETTKSE 728
            :.:|.:..|.|::      ||.::|.....:  .....:||..|:..||.:    ...:.|:|| 
 Worm   582 NEMKQRAEEYQARMRLTTIPTPTTTVETTTEYVHVPYPTLPVNEVVYDAHI----RKPIPTSKS- 641

  Fly   729 KDLSDTEYGEATVSTKVQTVLPTVDD-DAVQRAVEDVAAAVAHQEAEPQVQHFMTHDLGHRES 790
                        ::..|:...|.::: .....::||: .|:.:|.::.:.::.:..|....|:
 Worm   642 ------------IAEPVEHFRPIIENVTPASLSLEDI-IAMDNQRSDYEDEYDVPMDFPDTEA 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApplNP_001245448.1 A4_EXTRA 26..198 CDD:128326
APP_N 33..141 CDD:280358
APP_Cu_bd 143..198 CDD:289676
APP_E2 387..580 CDD:289677 39/245 (16%)
GBP_C <629..682 CDD:303769 15/63 (24%)
APP_amyloid 834..887 CDD:287486
F22E12.1NP_505684.2 KU 25..76 CDD:238057
KU 85..138 CDD:238057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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