DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Appl and Appl

DIOPT Version :10

Sequence 1:NP_001245448.1 Gene:Appl / 31002 FlyBaseID:FBgn0000108 Length:890 Species:Drosophila melanogaster
Sequence 2:XP_061503924.1 Gene:Appl / 1273174 VectorBaseID:AGAMI1_008885 Length:909 Species:Anopheles gambiae


Alignment Length:951 Identity:589/951 - (61%)
Similarity:675/951 - (70%) Gaps:118/951 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SLW-------VVLAIGTAQVQAASPRWEPQIAVLCEAGQIYQPQYLSEEGRWVTDLSKKTTGPTC 70
            |:|       :|....|...|||||||||||:|||||||.|.||:|||||||.||||.|..|.||
Mosquito     4 SVWPVAFALVLVTLYSTVPSQAASPRWEPQISVLCEAGQTYHPQFLSEEGRWTTDLSIKVPGSTC 68

  Fly    71 LRDKMDLLDYCKKAYPNRDITNIVESSHYQKIGGWCRQGALNAAKCKGSHRWIKPFRCL-GPFQS 134
            |||||||||||||.||.|||||||||||||||||||||||||||||||:.||||||||| |||||
Mosquito    69 LRDKMDLLDYCKKVYPGRDITNIVESSHYQKIGGWCRQGALNAAKCKGAQRWIKPFRCLEGPFQS 133

  Fly   135 DALLVPEGCLFDHIHNASRCWPFVRWNQTGAAACQERGMQMRSFAMLLPCGISVFSGVEFVCCPK 199
            |||||||||||||||||||||||||||||||||||:|.|||||||||||||||:|||||||||||
Mosquito   134 DALLVPEGCLFDHIHNASRCWPFVRWNQTGAAACQDRNMQMRSFAMLLPCGISLFSGVEFVCCPK 198

  Fly   200 HFKTDEIHVKKTDLPVMPAAQINSANDELVMNDEDDSNDSNYSKDANEDDLDDEDDLMGDDEEDD 264
            |||...:.||||||||:|       .|..::...||.:|.  :.|.|.:| |:|:|.|.|:|:::
Mosquito   199 HFKAVPMKVKKTDLPVLP-------QDTDMLPALDDGSDG--ASDNNSED-DEEEDEMDDEEDEE 253

  Fly   265 MVADEAATAGGSPNTGSSGDSNSGSLDDINAEYDSGEEGDN-YEEDGAGSESEAEVEASWDQSGG 328
            |:.||...                |.||   ||||.|:.|: .::..||:::.....|:||    
Mosquito   254 MLGDEPIE----------------SEDD---EYDSDEDFDSGSDKPAAGADTIDTGSAAWD---- 295

  Fly   329 AKVVSLKSDSSSPSSAPVAPAPEKAPVKSESVTS--TPQLSASAAAFVAANSGNSGTGA---GAP 388
                      |..:..|.|...:.|..|.:...|  ...|.|:|..:.||:|.....|.   ...
Mosquito   296 ----------SFTTPPPPATGNKDALKKQQQPDSLGAGMLYAAAGGYAAASSTERAAGGIELVTT 350

  Fly   389 PSTAQPTSDPYFTHFDPHYEHQSYK-------VSQKRLEESHREKVTRVMKDWSDLEEKYQDMRL 446
            |.||.||.|||||||||..||||:|       .:|:|||||||||||||||||||||||||||||
Mosquito   351 PITAIPTPDPYFTHFDPRNEHQSFKNLHAEFQEAQQRLEESHREKVTRVMKDWSDLEEKYQDMRL 415

  Fly   447 ADPKAAQSFKQRMTARFQTSVQALEEEGNAEKHQLAAMHQQRVLAHINQRKREAMTCYTQALTEQ 511
            ||||:||:|||||||||||||||||||||:|||||||||||||||||||||||||||||||||||
Mosquito   416 ADPKSAQTFKQRMTARFQTSVQALEEEGNSEKHQLAAMHQQRVLAHINQRKREAMTCYTQALTEQ 480

  Fly   512 PPNAHHVEKCLQKLLRALHKDRAHALAHYRHLLNSGGPGGLEAAASERPRTLERLIDIDRAVNQS 576
            ||::|.||||||||||||||||||||:||||||.|||.|||||||||||||||||:|||||||||
Mosquito   481 PPSSHRVEKCLQKLLRALHKDRAHALSHYRHLLGSGGTGGLEAAASERPRTLERLVDIDRAVNQS 545

  Fly   577 MTMLKRYPELSAKIAQLMNDYILALRSKDDIPGSSLGMSEEAEAGILDKYRVEIERKVAEKERLR 641
            |.|||||||||.|::|||:|||.||||||:.|||.|.|:|||||.||||||:||||||:||||.|
Mosquito   546 MAMLKRYPELSVKLSQLMDDYIQALRSKDETPGSMLAMTEEAEAAILDKYRMEIERKVSEKERQR 610

  Fly   642 LAEKQRKEQRAAEREKLREEKLRLEAKKVDDMLKSQVAEQQSQPTQSSTQSQAQQQQQEKSLPGK 706
            |||||||||||.||||:|||||||||||::...|.|..:||.|..|...|.|.|:|||.:....:
Mosquito   611 LAEKQRKEQRAQEREKIREEKLRLEAKKMEAAYKQQQQQQQQQQQQQQQQQQQQKQQQAQQQAQQ 675

  Fly   707 ELGPDAALVTAA-------------------NPNL----ETTKSEKDL---SDTE----YGEATV 741
            :....||...|.                   .|.|    :|.|.:.|:   .:||    |.|..|
Mosquito   676 QAQMIAATFAATQQQQQQQQQQQQQQSMQTQQPTLSEQPQTQKQQPDMEAQKETETTKDYSEEAV 740

  Fly   742 STKVQ-TVLPTVDDDAVQRAVEDVAAAVAHQEAEPQVQHFMTHDLGHRESSFSLRREFAQHAHAA 805
            .|..| |.||||||:|||||||:||||||||||||::||.:.||:||.|.|:|:|||.  ::.:.
Mosquito   741 VTSPQPTALPTVDDEAVQRAVEEVAAAVAHQEAEPKMQHVLAHDIGHGEPSYSVRREV--YSSSG 803

  Fly   806 KEGRNVYFTLSFAGIALMAAVFVGVAVAKWRTSRSPHAQGFIEVDQVG--------CQNVTTHH- 861
            ::.:|||||:.|||||||||||||||||||:.|||||||||:|||||.        |..:..|: 
Mosquito   804 RDSKNVYFTVGFAGIALMAAVFVGVAVAKWKASRSPHAQGFVEVDQVSGATGHGQRCPGIVLHYN 868

  Fly   862 ------------PIVREEKIVPNMQINGYENPTYKYFEVKE 890
                        |:..||:.|.||||||||||||||||:||
Mosquito   869 SNILPVFQAVGAPVTPEERHVANMQINGYENPTYKYFEIKE 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApplNP_001245448.1 A4_EXTRA 26..198 CDD:128326 155/172 (90%)
APP_E2 388..580 CDD:463752 170/198 (86%)
DDRGK 632..>682 CDD:370664 36/49 (73%)
APP_amyloid 834..887 CDD:463129 36/73 (49%)
ApplXP_061503924.1 None

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