DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Appl and aplp2

DIOPT Version :10

Sequence 1:NP_001245448.1 Gene:Appl / 31002 FlyBaseID:FBgn0000108 Length:890 Species:Drosophila melanogaster
Sequence 2:XP_017951425.2 Gene:aplp2 / 100380132 XenbaseID:XB-GENE-5894468 Length:753 Species:Xenopus tropicalis


Alignment Length:911 Identity:225/911 - (24%)
Similarity:353/911 - (38%) Gaps:255/911 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EPQIAVLCEAGQIYQPQYLSEEGRWVTDLSKKTTGPTCLRDKMDLLDYCKKAYPNRDITNIVESS 97
            |||:|:.|  |::.....: :.|:|..|.|..   .:|:..|.::|.||::.:|:..|||:||::
 Frog    38 EPQVAMFC--GKLNMHVNI-QTGKWEPDPSGT---KSCIGTKEEVLQYCQEVFPDLQITNVVEAN 96

  Fly    98 HYQKIGGWCRQGALNAAKCKGSHRWIKPFRCL-GPFQSDALLVPEGCLFDHIHNASRCWPFVRWN 161
            ....|..||::|   ..:|||....:.||:|| |.|.||.|||||.|.|.|......|.....|:
 Frog    97 QPVSIDNWCKKG---KKQCKGHSHIVVPFKCLVGEFVSDVLLVPEKCKFFHKERMDVCEGHQHWH 158

  Fly   162 QTGAAACQERGMQMRSFAMLLPCGISVFSGVEFVCCPKHFKTDEIHVKKTDLPVMPAAQINSAND 226
            .....||....|.:.|:.|||||.:..|.|.|:||||:                      ....|
 Frog   159 NVAKEACMTEVMVLHSYGMLLPCAVDQFRGAEYVCCPQ----------------------TKILD 201

  Fly   227 ELVMNDEDDSNDSNYSKDANEDDLD----------DEDDLMGDDEEDDMVADEAATAGGSPNTGS 281
            |.:..:|::.:|    ::.:|||.|          |.:|.....||::.|.||.           
 Frog   202 EALSKEEEEEDD----EEEDEDDYDLYKSEFPTEADVEDFTAAAEEEEEVEDEV----------- 251

  Fly   282 SGDSNSGSLDDINAEYDSGEEGDNYEEDGAGSESEAEVEASWDQSGGAKVVSLKSDSSSPSSAPV 346
                    ::|.:..|      |||:::...:|:..|.......||...:..:||..|  ..|..
 Frog   252 --------VEDRDYYY------DNYKDEDYNNENPTEPPNERQPSGKDIITDVKSVCS--QEAMT 300

  Fly   347 APAPEKAPVKSESVTSTPQLSASAAAFVAANSGNSGTG--------------AGAPPSTAQPTSD 397
            .|.....|.....:.     ......|:....|.:...              ....|:.|... |
 Frog   301 GPCRAMMPRWYFDLG-----QKKCVRFIYGGCGGNRNNFESEDYCMAVCKVMMAQTPAPADDV-D 359

  Fly   398 PYFTHFDPHYEHQSYKVSQKRLEESHREKVTRVMKDWSDLEEKYQDMRLADPKAAQSFKQRMTAR 462
            .||.......||..::.::::||..|..::.||.|:|.:.|.:.|.:    |||.   :|.:...
 Frog   360 VYFETLADDNEHARFQKAKEQLEVRHHNRMERVKKEWEEAESQAQSL----PKAE---RQTLIQH 417

  Fly   463 FQTSVQALEEEGNAEKHQLAAMHQQRVLAHINQRKREAMTCYTQALTEQPPNAHHVEKCLQKLLR 527
            ||.:|:|||:|..:||.||...|..||.|.:|.::|.|:..|..||....|..|.:.:.|::.:|
 Frog   418 FQATVKALEKEAASEKQQLVETHLARVEAMLNDKRRNALENYLSALQADSPRPHRILQALKRYVR 482

  Fly   528 ALHKDRAHALAHYRHLLNSGGPGGLEAAASERPRTLERLIDIDRAVNQSMTMLKRYPELSAKIAQ 592
            |.:|||.|.:.||.|:| :..|   |.||..:.:.:..|..|:..:|||:::|.:.|.       
 Frog   483 AENKDRLHTIRHYHHVL-AVDP---EKAAQMKSQVMTHLHVIEERMNQSLSLLYKVPY------- 536

  Fly   593 LMNDYILALRSKDDIPGSSLGMSEEAEAGILDKYRVEIERKVAEKERLRLAEKQRKEQRAAEREK 657
                                         :.|:.:.||:         .|.::||.:.       
 Frog   537 -----------------------------VADEIQDEID---------ELFQEQRTDM------- 556

  Fly   658 LREEKLRLEAKKVDDMLKSQVAEQQSQPTQSSTQSQAQQQQQEKSLP--GKELGPDAALVTAANP 720
                          |...|..:|.|.....||.:|       |:.||  ||...|   ......|
 Frog   557 --------------DQFTSSFSESQGDVRVSSEES-------EEILPKDGKPFRP---FQVKTFP 597

  Fly   721 NLETTKSEKDLSDTEY------GEATVST------KVQTVLPTVDDDAVQRAVEDVAAAVAHQEA 773
            ::  |:||:...|:..      |.|.::|      |:.......|...|.....||...:.:.|.
 Frog   598 SI--TESEETQRDSYLPVRKGSGMADLNTLIGAEEKIINSKSKADQKVVIDETLDVKEMIFNAER 660

  Fly   774 ------EPQVQHFMTHDLGHRESSFSLRREFAQHAHAAKEGRNVYFTLSFAGIALMAAVFVGVAV 832
                  ||             ::...||.||                 ||:..||:..:.:.||:
 Frog   661 VSGLVDEP-------------DTDGPLRNEF-----------------SFSSGALIGLLVIAVAI 695

  Fly   833 A-----------KWRTSRSPHAQGFIEVDQVGCQNVTTHHPIVREEKIVPNMQINGYENPTYKYF 886
            |           |.:.....|  |.:|||.:          :..||:.:..||.:|||||||||.
 Frog   696 ATIIVISLVLLRKRQYGTISH--GIVEVDPM----------LTPEERHLNKMQNHGYENPTYKYL 748

  Fly   887 E 887
            |
 Frog   749 E 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApplNP_001245448.1 A4_EXTRA 26..198 CDD:128326 60/165 (36%)
APP_E2 388..580 CDD:463752 63/191 (33%)
DDRGK 632..>682 CDD:370664 6/49 (12%)
APP_amyloid 834..887 CDD:463129 19/52 (37%)
aplp2XP_017951425.2 A4_EXTRA 31..195 CDD:128326 60/165 (36%)
Kunitz_ABPP-like 293..344 CDD:438650 6/57 (11%)
APP_E2 350..531 CDD:463752 63/192 (33%)
JMTM_APLP2 670..750 CDD:411992 31/109 (28%)

Return to query results.
Submit another query.