DRSC/TRiP Functional Genomics Resources

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Protein Alignment Appl and aplp1

DIOPT Version :10

Sequence 1:NP_001245448.1 Gene:Appl / 31002 FlyBaseID:FBgn0000108 Length:890 Species:Drosophila melanogaster
Sequence 2:NP_001120906.1 Gene:aplp1 / 100151735 XenbaseID:XB-GENE-853203 Length:643 Species:Xenopus tropicalis


Alignment Length:20 Identity:7/20 - (35%)
Similarity:8/20 - (40%) Gaps:6/20 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IIPGSRN------LQRSTIF 26
            :|...||      |.|.|.|
 Frog    24 VISSIRNFLIYVALLRVTPF 43

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ApplNP_001245448.1 A4_EXTRA 26..198 CDD:128326 1/1 (100%)
APP_E2 388..580 CDD:463752
DDRGK 632..>682 CDD:370664
APP_amyloid 834..887 CDD:463129
aplp1NP_001120906.1 A4_EXTRA 28..187 CDD:128326 6/16 (38%)
APP_E2 273..452 CDD:463752
JMTM_Notch_APP 557..641 CDD:425406
Blue background indicates that the domain is not in the aligned region.

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