DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4293 and ERV46

DIOPT Version :9

Sequence 1:NP_001033816.1 Gene:CG4293 / 31001 FlyBaseID:FBgn0024983 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_009358.1 Gene:ERV46 / 851256 SGDID:S000000040 Length:415 Species:Saccharomyces cerevisiae


Alignment Length:446 Identity:103/446 - (23%)
Similarity:162/446 - (36%) Gaps:138/446 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KSNLLEFAKNLDAFKKVPEKYTETSEIGGTLSLLSRLLIVYLVYTELHYYWHETDIVYQFEPDIA 75
            :|.||    :||||.|..|.....:..||.::|...|..::|:..|    |.:.:.|.. .|.:.
Yeast     3 RSTLL----SLDAFAKTEEDVRVRTRAGGLITLSCILTTLFLLVNE----WGQFNSVVT-RPQLV 58

  Fly    76 LDE----QVQMHVDITV-AMPCASLSGVDLMD---ETQQDVFAYG-TLQREGVWWEMSEHDRLQF 131
            :|.    ::::::|:|. :||| .|..:|:||   |.|.|:...| |:.|               
Yeast    59 VDRDRHAKLELNMDVTFPSMPC-DLVNLDIMDDSGEMQLDILDAGFTMSR--------------- 107

  Fly   132 QAIQIQNHYLREEFHSVADVLFKDIMRDNHPARESASKAPAAPPP---GALPLSVDLHGRHNVQP 193
                     |..|...|.|.      .:.|........||....|   |....:.|.....|:..
Yeast   108 ---------LNSEGRPVGDA------TELHVGGNGDGTAPVNNDPNYCGPCYGAKDQSQNENLAQ 157

  Fly   194 ESK--------------------FD----------------------ACRLHGTLGINKVAGVLH 216
            |.|                    ||                      .||:.|:..||::.|.||
Yeast   158 EEKVCCQDCDAVRSAYLEAGWAFFDGKNIEQCEREGYVSKINEHLNEGCRIKGSAQINRIQGNLH 222

  Fly   217 LVGGA--QPVVGLFEDHWMIELRRMPANFTHRINRLSFG--------------QYSGRIV--QPL 263
            ...|.  |...|.|.|..:.: :....||.|.||.||||              ::.|.:|  .||
Yeast   223 FAPGKPYQNAYGHFHDTSLYD-KTSNLNFNHIINHLSFGKPIQSHSKLLGNDKRHGGAVVATSPL 286

  Fly   264 EGDEIV------IHEEATTVQYFLKVVPTEI-HQTFTTIYAFQYAVTENVRKLDSERNS------ 315
            :|.::.      .|:    ..||.|:|||.. :.....|...|::.|.:.|.|...|:.      
Yeast   287 DGRQVFPDRNTHFHQ----FSYFAKIVPTRYEYLDNVVIETAQFSATFHSRPLAGGRDKDHPNTL 347

  Fly   316 ---YGSPGIYFKYDWSALKIIVRNDRDHLVT---FAIRLCSIISGIIVISGAINAL 365
               .|.||::..::.|.||:|  |...|..|   |.:...:.|.|::.:...::.|
Yeast   348 HVRGGIPGMFVFFEMSPLKVI--NKEQHGQTWSGFILNCITSIGGVLAVGTVMDKL 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4293NP_001033816.1 ERGIC_N 19..104 CDD:290561 25/92 (27%)
COPIIcoated_ERV <200..349 CDD:285244 51/185 (28%)
ERV46NP_009358.1 ERGIC_N 6..96 CDD:404692 28/99 (28%)
COPIIcoated_ERV 143..399 CDD:400361 59/262 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0445
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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