DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4293 and AT1G50950

DIOPT Version :9

Sequence 1:NP_001033816.1 Gene:CG4293 / 31001 FlyBaseID:FBgn0024983 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001323412.1 Gene:AT1G50950 / 841517 AraportID:AT1G50950 Length:489 Species:Arabidopsis thaliana


Alignment Length:507 Identity:90/507 - (17%)
Similarity:167/507 - (32%) Gaps:202/507 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KNLDAFKKVPEKYTETSEIGGTLSLLSRLLIVYLVYTELHYYWHETDIVYQFEPDIALDEQVQ-- 81
            |::|.::|:|...||.|..|..||:::.|.:::|...||..|     :.......:.:|:...  
plant     8 KSVDFYRKIPRDLTEASLSGAGLSIVAALAMLFLFGMELSSY-----LAINTSTSVIVDKSSDGD 67

  Fly    82 -MHVDITVAMPCAS--LSGVDLMDETQQDVFAYGTLQREGVWWEMSEHDRLQ----FQAIQIQNH 139
             :::|..::.|..|  .:.||:.|       .:||             .||.    .:.:.|..|
plant    68 FLNIDFNISFPALSCEFASVDVSD-------VFGT-------------HRLNISKTIRKVPIDPH 112

  Fly   140 YLR---EEFHSVADVLFKDIMRDNHPARESASKAPA--------------------AP------- 174
             ||   |||||.:|:...:...::|....:.:..|.                    ||       
plant   113 -LRATAEEFHSTSDLHLINHGDEDHGDNSTYADIPLTGAAFEKFTHHFQILVVNFYAPWCYWSNR 176

  Fly   175 ----------------PPG--------------------ALPL---------SVDL--------- 185
                            .||                    :||:         |:.:         
plant   177 LKPSWVKASQITRERYNPGTDDRVLLGSVDCTEEPTLCKSLPIFSNHIQGYPSIRIFRRGSGLRE 241

  Fly   186 -HGRHN--------------------VQPESKFD-----------------------ACRLHGTL 206
             ||.|.                    ::|..|.|                       .||:.|.:
plant   242 DHGNHEHESYYGDRDTDSLVKMVEELLKPIKKEDHKLALDGKSDNAASTFKKAPVSGGCRIEGYV 306

  Fly   207 GINKVAGVLHLVGGAQPVVGLFEDHWMIELRRMPANFTHRINRLSFG---------------QYS 256
            ...||.|  .||..|......|:...|        |.:|.:..|:||               .|.
plant   307 RAKKVPG--ELVISAHSGAHSFDASQM--------NMSHIVTHLTFGTMVSERLWTDMKRLLPYL 361

  Fly   257 GRIVQPLEGDEIVIHEEA---TTVQYFLKVVPTEI-----HQTFTTIYAFQYAVTENVRKLDSER 313
            |:....|.|...:...:.   .|::::|:::.||:     .|..:.|..::|....:|.:     
plant   362 GQSYDRLNGKSFINERQLDANVTIEHYLQIIKTEVISRRSGQEHSLIEEYEYTAHSSVAR----- 421

  Fly   314 NSYGSPGIYFKYDWSALKIIVRNDRDHLVTFAIRLCSIISGIIVISGAINAL 365
             ||..|...|.::.|.:::::..:......|...:|:||.|:..::|.::::
plant   422 -SYHYPEAKFHFELSPMQVLISENPKSFSHFITNVCAIIGGVFTVAGILDSI 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4293NP_001033816.1 ERGIC_N 19..104 CDD:290561 22/89 (25%)
COPIIcoated_ERV <200..349 CDD:285244 34/171 (20%)
AT1G50950NP_001323412.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0445
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1318747at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10984
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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