DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4293 and AT1G22200

DIOPT Version :10

Sequence 1:NP_569847.1 Gene:CG4293 / 31001 FlyBaseID:FBgn0024983 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_564162.1 Gene:AT1G22200 / 838825 AraportID:AT1G22200 Length:386 Species:Arabidopsis thaliana


Alignment Length:372 Identity:107/372 - (28%)
Similarity:185/372 - (49%) Gaps:35/372 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KNLDAFKKVPEKYTETSEIGGTLSLLSRLLIVYLVYTELHYYWH---ETDIVYQFEPDIALDEQV 80
            :||||:.|:.|.:...:..||.::|.|.::::.|.::||..|.|   ||    |...|.:..|::
plant     9 RNLDAYPKINEDFYRRTLSGGVITLASSIVMLILFFSELQLYIHPVTET----QLRVDTSRGEKL 69

  Fly    81 QMHVDITV-AMPCA--SLSGVDLMDETQQDV---FAYGTLQREGVWWEMSEHDRLQFQAIQ--IQ 137
            :::.|:|. |:.|:  ||..:|:..|...||   .....|...|...| ::.|.:....|:  :|
plant    70 RINFDVTFPALQCSIISLDSMDISGERHLDVRHDIIKRRLDSSGNVIE-AKQDGIGHTKIEKPLQ 133

  Fly   138 NHYLREEFHSV-------ADVLFKDIMRDNHPARESASKAPAAPPPGALPLSVDLHGRHN-VQ-- 192
            .|..|.|.:..       |:.............||:..|...|...   |.|:|...|.. ||  
plant   134 KHGGRLEHNETYCGSCFGAEASDDACCNSCEEVREAYRKKGWALSD---PESIDQCKREGFVQKV 195

  Fly   193 PESKFDACRLHGTLGINKVAGVLHLVGGAQPVVGLFEDHWMIELRRMPANFTHRINRLSFGQYSG 257
            .:.:.:.|.:||.|.:|||||..|.:.|.......|:.|.|:..::...|.:|::|||:||.:..
plant   196 KDEEGEGCNVHGFLEVNKVAGNFHFIPGQSFHQSGFQFHDMLLFQQGNYNISHKVNRLAFGDFFP 260

  Fly   258 RIVQPLEGDEIVIHEEATTVQYFLKVVP---TEIHQTFTTIYAFQYAVTENVRKLDSERNSYGSP 319
            .:|.||:|.:....:::...|||:||||   |::||  .||.:.|::|||:.:.:::.| ....|
plant   261 GVVNPLDGVQWNQGKQSGVYQYFIKVVPSIYTDVHQ--NTIQSNQFSVTEHFQNMEAGR-MQSPP 322

  Fly   320 GIYFKYDWSALKIIVRNDRDHLVTFAIRLCSIISGIIVISGAINALL 366
            |::|.||.|.:|:|........:.|...:|:|:.||..:||.:::.:
plant   323 GVFFYYDLSPIKVIFEEQHVEFLHFLTNVCAIVGGIFTVSGIVDSFI 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4293NP_569847.1 ERGIC_N 19..106 CDD:464000 28/92 (30%)
COPIIcoated_ERV <200..349 CDD:462327 51/151 (34%)
AT1G22200NP_564162.1 ERGIC_N 8..98 CDD:464000 28/92 (30%)
COPIIcoated_ERV 149..366 CDD:462327 68/222 (31%)

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