DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4293 and si:ch211-225b10.3

DIOPT Version :9

Sequence 1:NP_001033816.1 Gene:CG4293 / 31001 FlyBaseID:FBgn0024983 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_003199668.2 Gene:si:ch211-225b10.3 / 557041 ZFINID:ZDB-GENE-130531-53 Length:365 Species:Danio rerio


Alignment Length:390 Identity:127/390 - (32%)
Similarity:197/390 - (50%) Gaps:51/390 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LEFAKNLDAFKKVPEKYTETSEIGGTLSLLSRLLIVYLVYTELHYYWHETDIVYQFEPDIALDEQ 79
            :...||||||.||||.|..||..|||::|...:|:..|..:|...| .:|.:.|::|.|.....:
Zfish    12 ISIIKNLDAFPKVPESYVATSAFGGTVTLTVFILMALLTISEFFVY-QDTWMKYEYEVDRDFTSK 75

  Fly    80 VQMHVDITVAMPCASLSGVDLMD---------ETQQDVFAYGTLQREGVWWEMSEHDRLQFQAIQ 135
            :::.:||||||.|..| |.|::|         |.:.|..::....::..|:::.:         |
Zfish    76 LKIKIDITVAMKCERL-GADVLDIAGAVVASKEIKYDSVSFDPSAQKKQWYQILQ---------Q 130

  Fly   136 IQNHYLREEFHSVADVLFKDIMRDNHPARESASKAPAAPPPGALPLSVDLHGRHNVQPESKFDAC 200
            |||. |||| .|:.|||||..::...     :..||...|                .|||: :||
Zfish   131 IQNR-LREE-QSLQDVLFKSALKGYF-----SDPAPRVDP----------------TPESQ-NAC 171

  Fly   201 RLHGTLGINKVAGVLHLVGGAQPVVGLFEDHWMIELRRMPANFTHRINRLSFGQYSGRIVQPLEG 265
            |:||.:.:|||||..|:..|..........|:...::....||:|||:.||||......:.||:|
Zfish   172 RIHGKIYVNKVAGNFHITLGKPIETHKGHAHYASFIKDEVYNFSHRIDHLSFGNDVPGHINPLDG 236

  Fly   266 DEIVIHEEATTVQYFLKVVPTEIHQTFTTIYAFQYAVTENVRKLDSERNSYGSPGIYFKYDWSAL 330
            .|....|:.|..|||:.||||::|.:..::...|::|||..|.:.:|:.:.|..||:|||..|.|
Zfish   237 MEKTTLEQNTLFQYFITVVPTKLHTSNVSVDMHQFSVTERERVVSNEKGNQGVSGIFFKYKLSPL 301

  Fly   331 KIIVRNDRDHLVTFAIRLCSIISGIIVISGAINAL------LLSIRSRLLRTFAPVLYNRLTRAK 389
            .:.|..:...|..|.:|||.|:.||...|..::.|      ::..|.||......|| ||:::::
Zfish   302 MVRVSEEHMPLAAFLVRLCGIVGGIFSTSDLLHRLIGSFVDIICFRFRLANKDREVL-NRVSQSE 365

  Fly   390  389
            Zfish   366  365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4293NP_001033816.1 ERGIC_N 19..104 CDD:290561 36/93 (39%)
COPIIcoated_ERV <200..349 CDD:285244 53/148 (36%)
si:ch211-225b10.3XP_003199668.2 ERGIC_N 15..100 CDD:316374 36/86 (42%)
COPIIcoated_ERV <171..342 CDD:311775 60/170 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593656
Domainoid 1 1.000 113 1.000 Domainoid score I6101
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 187 1.000 Inparanoid score I3909
OMA 1 1.010 - - QHG52864
OrthoDB 1 1.010 - - D1318747at2759
OrthoFinder 1 1.000 - - FOG0004385
OrthoInspector 1 1.000 - - otm26171
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10984
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4761
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1010.010

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