DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4293 and ergic3

DIOPT Version :9

Sequence 1:NP_001033816.1 Gene:CG4293 / 31001 FlyBaseID:FBgn0024983 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_012827072.2 Gene:ergic3 / 407904 XenbaseID:XB-GENE-941877 Length:389 Species:Xenopus tropicalis


Alignment Length:395 Identity:98/395 - (24%)
Similarity:174/395 - (44%) Gaps:77/395 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KNLDAFKKVPEKYTETSEIGGTLSLLSRLLIVYLVYTELHYYWHETDIVYQFEPDIALD----EQ 79
            :..||:.|..|.:...:..|..::::|.|:::.|.::||.||     :..:..|::.:|    ::
 Frog     8 RQFDAYPKTLEDFRVKTCGGALVTVISGLIMLILFFSELQYY-----LTKEIYPELFVDKSRGDK 67

  Fly    80 VQMHVDITVA-MPCASLSGVDLMD---ETQQDVFAYGTLQREGVWWEMSEHDRLQFQAIQIQNHY 140
            :::::|:... ||||.|| :|.||   |.|.||       ...::.:..:.|:....: :...|.
 Frog    68 LKINIDVIFPHMPCAYLS-IDAMDVAGEQQLDV-------EHNLFKQRLDKDKKPVTS-EADRHE 123

  Fly   141 L-REEFHSVADVL-----------------FK-----DIMRDNHPARESASKAPAAPPPGALPLS 182
            | :.|.|.|.|..                 |.     |.:|:.:..|..|.|.|.         |
 Frog   124 LGKSEEHVVFDPKSLDPNRCESCYGAETDDFSCCNTCDDVREAYRRRGWAFKTPD---------S 179

  Fly   183 VD---LHGRHNVQPESKFDACRLHGTLGINKVAGVLHLVGG-----AQPVVGLFEDHWMIELRRM 239
            ::   ..|......|.|.:.|:::|.|.:|||||..|...|     :...|...|.|.:......
 Frog   180 IEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQSFGLD 244

  Fly   240 PANFTHRINRLSFGQ-YSGRIVQPLEGDEIVIHEEATTVQYFLKVVPT-------EIHQTFTTIY 296
            ..|.||.|..||||: |.| :|.||:|..:...:.:...|||:|:|||       |:.:|     
 Frog   245 NINMTHEIRHLSFGRDYPG-LVNPLDGSSVAAMQSSMMFQYFVKIVPTVYVKVDGEVLRT----- 303

  Fly   297 AFQYAVTENVRKLDSERNSYGSPGIYFKYDWSALKIIVRNDRDHLVTFAIRLCSIISGIIVISGA 361
             .|::||.:.:..:......|.||::..|:.|.:.:.:.........|...:|:||.|:..::|.
 Frog   304 -NQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGVFTVAGL 367

  Fly   362 INALL 366
            |::|:
 Frog   368 IDSLV 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4293NP_001033816.1 ERGIC_N 19..104 CDD:290561 24/92 (26%)
COPIIcoated_ERV <200..349 CDD:285244 45/161 (28%)
ergic3XP_012827072.2 ERGIC_N 7..97 CDD:404692 25/94 (27%)
COPIIcoated_ERV 146..369 CDD:400361 61/238 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1318747at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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