DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4293 and ergic3

DIOPT Version :9

Sequence 1:NP_001033816.1 Gene:CG4293 / 31001 FlyBaseID:FBgn0024983 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001028277.1 Gene:ergic3 / 393990 ZFINID:ZDB-GENE-040426-795 Length:388 Species:Danio rerio


Alignment Length:399 Identity:101/399 - (25%)
Similarity:169/399 - (42%) Gaps:86/399 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KNLDAFKKVPEKYTETSEIGGTLSLLSRLLIVYLVYTELHYYWHETDIVYQFEPDIALD----EQ 79
            |..||:.|..|.:...:..|.|::::|.|:::.|.::||.||     :..:..|::.:|    ::
Zfish     8 KQFDAYPKTLEDFRIKTCGGATVTIISGLIMLILFFSELQYY-----LTKEVHPELFVDTSRGDK 67

  Fly    80 VQMHVDITVA-MPCASLSGVDLMD---ETQQDVFAYGTLQREGVWWEMSEHD----RL----QFQ 132
            :::::|:... ||||.|| :|.||   |.|.||                ||:    ||    |..
Zfish    68 LRINIDVIFPHMPCAYLS-IDAMDVAGEQQLDV----------------EHNLFKQRLDKDGQPV 115

  Fly   133 AIQIQNHYLREEFHSVADVLFK----------------------DIMRDNHPARESASKAPAAPP 175
            ..:.:.|.|.:|...|.|....                      |.:|:.:..|..|.|.|....
Zfish   116 TTEAEKHDLGKEEEGVFDPSTLDPDRCESCYGAETDDLKCCNTCDDVREAYRRRGWAFKTPDTIE 180

  Fly   176 PGALPLSVDLHGRHNVQPESKFDACRLHGTLGINKVAGVLHLVGG-----AQPVVGLFEDHWMIE 235
                  .....|......|.|.:.|:::|.|.:|||||..|...|     :...|...|.|.:..
Zfish   181 ------QCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQS 239

  Fly   236 LRRMPANFTHRINRLSFGQ-YSGRIVQPLEGDEIVIHEEATTVQYFLKVVPT-------EIHQTF 292
            ......|.||.|..||||: |.| ||.||:...:...:.:...|||:|:|||       |:.:| 
Zfish   240 FGLDNINMTHFIKHLSFGKDYPG-IVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVKT- 302

  Fly   293 TTIYAFQYAVTENVRKLDSERNSYGSPGIYFKYDWSALKIIVRNDRDHLVTFAIRLCSIISGIIV 357
                 .|::||.:.:..:......|.||::..|:.|.:.:.....:.....|...:|:||.|:..
Zfish   303 -----NQFSVTRHEKIANGLIGDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVFT 362

  Fly   358 ISGAINALL 366
            ::|.|::|:
Zfish   363 VAGLIDSLI 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4293NP_001033816.1 ERGIC_N 19..104 CDD:290561 26/92 (28%)
COPIIcoated_ERV <200..349 CDD:285244 45/161 (28%)
ergic3NP_001028277.1 ERGIC_N 7..97 CDD:290561 27/94 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..132 4/21 (19%)
COPIIcoated_ERV 145..368 CDD:285244 59/235 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0445
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1318747at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.