DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4293 and CG4610

DIOPT Version :10

Sequence 1:NP_569847.1 Gene:CG4293 / 31001 FlyBaseID:FBgn0024983 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_611677.1 Gene:CG4610 / 37571 FlyBaseID:FBgn0034735 Length:661 Species:Drosophila melanogaster


Alignment Length:189 Identity:44/189 - (23%)
Similarity:67/189 - (35%) Gaps:38/189 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 VAMPCASLSGVDLMDETQQDVFAYGTLQRE---GVWWEMSEHDRLQFQAIQIQNHYLREEFHSVA 149
            |...|..:|||.           |..|.|.   .||...::.||      |:....:::|.||..
  Fly    93 VCARCCDVSGVH-----------YKVLNRRRGPAVWGPRAQIDR------QLYKKAVQQELHSTP 140

  Fly   150 DVLFKDIMRDNHPARESASKAPAAPPPGALPLSVD-LHGRHNVQPESKFDACRLHGTLGIN-KVA 212
            ::..:....|| ...|......|....|.|..:.: :..|..|.....|  .|.|..:|:. :.|
  Fly   141 NLEIRAAAVDN-LLIEDEQDTQARRCTGVLLANGEVVRSRSVVLTTGTF--LRAHINIGLEVRPA 202

  Fly   213 GVLHLVGGAQPVVGLFE--DHWMIELRRMPANFTHRI--NRLSFGQYSGRIVQPLEGDE 267
            |.:    |..|...|.|  |.....:.|:......||  :.:.|.|     :|..|||:
  Fly   203 GRI----GDAPAKALGEAIDRLGFRMGRLKTGTPPRIAKDSVDFSQ-----LQRHEGDD 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4293NP_569847.1 ERGIC_N 19..106 CDD:464000 5/17 (29%)
COPIIcoated_ERV <200..349 CDD:462327 19/73 (26%)
CG4610NP_611677.1 MnmG 28..661 CDD:440214 44/189 (23%)

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