DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4293 and SPAC24B11.08c

DIOPT Version :9

Sequence 1:NP_001033816.1 Gene:CG4293 / 31001 FlyBaseID:FBgn0024983 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_592845.1 Gene:SPAC24B11.08c / 2541538 PomBaseID:SPAC24B11.08c Length:390 Species:Schizosaccharomyces pombe


Alignment Length:394 Identity:87/394 - (22%)
Similarity:165/394 - (41%) Gaps:72/394 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KNLDAFKKVPEKYTETSEIGGTLSLLSRLLIVYLVYTELHYYWHETDIVYQFEPDIALDEQVQMH 83
            :..|||:|..|.....:..||.::|:|.|:::::|..|...| .....|::...:.:..::::::
pombe     8 RRFDAFQKTVEDARIKTASGGLITLVSGLIVIFIVLMEWINY-RRVIAVHEIIVNPSHGDRMEIN 71

  Fly    84 VDITV-AMPCASLSGVDLMD---ETQQDVFAYGTLQREGVWWEMSEHDRLQF---QAIQIQNHYL 141
            .:||. .:||..|: ||::|   |.|:|:....:..|.....|:...|.|..   |:|.......
pombe    72 FNITFPRIPCQILT-VDVLDVSGEFQRDIHHTVSKTRLSPSGEIISVDDLDIGNQQSISDDGAAE 135

  Fly   142 REEFHSVADVLFKD---IMRDNHPARESASKAPAAPPPGALPLSVDLHGR--------------- 188
            ..:.:..||...:|   ........|::..||               |.|               
pombe   136 CGDCYGAADFAPEDTPGCCNTCDAVRDAYGKA---------------HWRIGDVDAFKQCKDENF 185

  Fly   189 HNVQPESKFDACRLHGTLGINKVAGVLHLVGGAQPVVGLFEDH----WMIELRRMPANFTHRINR 249
            ..:....|.:.|.|.|.|.:|::||..|:..|.....|....|    ::.||..  .:.:|.|:.
pombe   186 KELYEAQKVEGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDYINELDL--HDMSHSIHH 248

  Fly   250 LSFG-------QYSGRIVQPLEGDEIVIHEEATTVQYFLKVVPTE---IHQTFTTIYAFQYAVTE 304
            ||||       .||    .||:|....:.......:||:|.|..:   :.::...|...:||||:
pombe   249 LSFGPPLDASVHYS----NPLDGTVKKVSTADYRYEYFIKCVSYQFMPLSKSTLPIDTNKYAVTQ 309

  Fly   305 NVR--------KLDSERNSYGS-PGIYFKYDWSALKIIVRNDRDHLV-TFAIRLCSIISGIIVIS 359
            :.|        |:.:..|.:|. ||::|::|.|.:::|.|..|.:.. .|...:.:::.|.:.::
pombe   310 HERSIRGGREEKVPTHVNFHGGIPGVWFQFDISPMRVIERQVRGNTFGGFLSNVLALLGGCVTLA 374

  Fly   360 GAIN 363
            ..::
pombe   375 SFVD 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4293NP_001033816.1 ERGIC_N 19..104 CDD:290561 22/88 (25%)
COPIIcoated_ERV <200..349 CDD:285244 46/172 (27%)
SPAC24B11.08cNP_592845.1 ERGIC_N 7..96 CDD:290561 23/89 (26%)
COPIIcoated_ERV 139..378 CDD:285244 56/259 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0445
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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