Protein Alignment CG4293 and erv46

DIOPT Version :10

• Sequence 1: NP_569847.1
• Gene: CG4293 / 31001
• FlyBaseID: FBgn0024983
• Length: 441
• Species: Drosophila melanogaster
• Sequence 2: NP_592845.1
• Gene: erv46 / 2541538
• PomBaseID: SPAC24B11.08C
• Length: 390
• Species: Schizosaccharomyces pombe
• Alignment Length: 394
• Identity: 87/394 - (22%)
• Similarity: 165/394 - (41%)
• Gaps: 72/394 - (18%)

  Fly    19 KNLDAFKKVPEKYTETSEIGGTLSLLSRLLIVYLVYTELHYYWHETDIVYQFEPDIALDEQVQMH 83
            :..|||:|..|.....:..||.::|:|.|:::::|..|...| .....|::...:.:..::::::
pombe     8 RRFDAFQKTVEDARIKTASGGLITLVSGLIVIFIVLMEWINY-RRVIAVHEIIVNPSHGDRMEIN 71

  Fly    84 VDITV-AMPCASLSGVDLMD---ETQQDVFAYGTLQREGVWWEMSEHDRLQF---QAIQIQNHYL 141
            .:||. .:||..|: ||::|   |.|:|:....:..|.....|:...|.|..   |:|.......
pombe    72 FNITFPRIPCQILT-VDVLDVSGEFQRDIHHTVSKTRLSPSGEIISVDDLDIGNQQSISDDGAAE 135

  Fly   142 REEFHSVADVLFKD---IMRDNHPARESASKAPAAPPPGALPLSVDLHGR--------------- 188
            ..:.:..||...:|   ........|::..||               |.|
pombe   136 CGDCYGAADFAPEDTPGCCNTCDAVRDAYGKA---------------HWRIGDVDAFKQCKDENF 185

  Fly   189 HNVQPESKFDACRLHGTLGINKVAGVLHLVGGAQPVVGLFEDH----WMIELRRMPANFTHRINR 249
            ..:....|.:.|.|.|.|.:|::||..|:..|.....|....|    ::.||..  .:.:|.|:.
pombe   186 KELYEAQKVEGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDYINELDL--HDMSHSIHH 248

  Fly   250 LSFG-------QYSGRIVQPLEGDEIVIHEEATTVQYFLKVVPTE---IHQTFTTIYAFQYAVTE 304
            ||||       .||    .||:|....:.......:||:|.|..:   :.::...|...:||||:
pombe   249 LSFGPPLDASVHYS----NPLDGTVKKVSTADYRYEYFIKCVSYQFMPLSKSTLPIDTNKYAVTQ 309

  Fly   305 NVR--------KLDSERNSYGS-PGIYFKYDWSALKIIVRNDRDHLV-TFAIRLCSIISGIIVIS 359
            :.|        |:.:..|.:|. ||::|::|.|.:::|.|..|.:.. .|...:.:::.|.:.::
pombe   310 HERSIRGGREEKVPTHVNFHGGIPGVWFQFDISPMRVIERQVRGNTFGGFLSNVLALLGGCVTLA 374

  Fly   360 GAIN 363
            ..::
pombe   375 SFVD 378

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4293	NP_569847.1	ERGIC_N	19..106	CDD:464000	23/90 (26%)
		COPIIcoated_ERV	<200..349	CDD:462327	46/172 (27%)
erv46	NP_592845.1	ERGIC_N	7..96	CDD:464000	23/89 (26%)
		COPIIcoated_ERV	139..378	CDD:462327	56/259 (22%)