Protein Alignment CG4293 and erv41

DIOPT Version :10

• Sequence 1: NP_569847.1
• Gene: CG4293 / 31001
• FlyBaseID: FBgn0024983
• Length: 441
• Species: Drosophila melanogaster
• Sequence 2: NP_596065.1
• Gene: erv41 / 2540311
• PomBaseID: SPBC2G5.04C
• Length: 333
• Species: Schizosaccharomyces pombe
• Alignment Length: 369
• Identity: 95/369 - (25%)
• Similarity: 172/369 - (46%)
• Gaps: 76/369 - (20%)

  Fly    12 SNLLEFAKNLDAFKKVPEKY-TETSEIGGTLSLLSRLLIVYLVYTELHYY---WHETDI-VYQFE 71
            :|:..|    |||.|..::| .::|..||..::|..:|||.||:::...|   ..|.:: :|.
pombe     8 ANIRAF----DAFPKFSKEYRRQSSSRGGFFTILLSVLIVVLVFSQCVQYIRGIREQELFIYD-- 66

  Fly    72 PDIALDEQVQMHVDITVAMPCASLSGVDLMDETQQDVFAYGTLQREGVWWEMSEHDRLQFQAIQI 136
               ::.|.:.:::|||:||||::|. :|::|.|:..|.|                    .:|:.:
pombe    67 ---SVSELMDLNIDITIAMPCSNLR-IDVVDRTKDLVLA--------------------TEALTL 107

  Fly   137 QNHYLREEFHSVADVLFKDIMRDNHPARESASKAPAAPPPGALPLSVDLHGRHNVQPESKFDACR 201
            :..::::  ...:..::|:   |.:.....|.             :.....::|.:|.|. .|||
pombe   108 EEAFIKD--MPTSSTIYKN---DRYAGLRWAR-------------TEKFRKKNNAEPGSG-TACR 153

  Fly   202 LHGTLGINKVAGVLHLVGGAQPVVGLFEDHWMIELRRMP---ANFTHRINRLSFGQYSGRIVQPL 263
            ::|.|.:|:|.|.||:....          |......:|   .||||.|..||||:|...:|..|
pombe   154 IYGQLVVNRVNGQLHITAPG----------WGYGRSNIPFHSLNFTHYIEELSFGEYYPALVNAL 208

  Fly   264 EGDEIVIHEEATTVQYFLKVVPTEIHQTFTTIYAFQYAVTEN--VRKLDSERNSYGS--PGIYFK 324
            :|.....::.....||:|.|:||....:|.:....||::|||  ||:|     .:||  |||:..
pombe   209 DGHYGHANDHPFAFQYYLSVLPTSYKSSFRSFETNQYSLTENSVVRQL-----GFGSLPPGIFID 268

  Fly   325 YDWSALKIIVRNDRDHLVTFAIRLCSIISGIIVISGAINALLLS 368
            ||...|.:.|.:...::.:..:|:.:|..|:|.::..|..:..|
pombe   269 YDLEPLAVRVVDKHPNVASTLLRILAISGGLITVASWIERVYSS 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4293	NP_569847.1	ERGIC_N	19..106	CDD:464000	29/91 (32%)
		COPIIcoated_ERV	<200..349	CDD:462327	49/155 (32%)
erv41	NP_596065.1	ERGIC_N	10..100	CDD:464000	30/99 (30%)
		COPIIcoated_ERV	136..306	CDD:462327	56/185 (30%)