DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4293 and LOC1269566

DIOPT Version :10

Sequence 1:NP_569847.1 Gene:CG4293 / 31001 FlyBaseID:FBgn0024983 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_308209.5 Gene:LOC1269566 / 1269566 VectorBaseID:AGAMI1_014779 Length:666 Species:Anopheles gambiae


Alignment Length:173 Identity:35/173 - (20%)
Similarity:60/173 - (34%) Gaps:41/173 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 VAMPCASLSGVDLMDETQQDVFAYGTLQRE---GVWWEMSEHDRLQFQAIQIQNHYLREEFHSVA 149
            |...|...|||.           |..|.|.   .||...::.||..::. ::|.........::.
Mosquito   100 VCARCCDRSGVQ-----------YKVLNRRKGPAVWGPRAQIDRKLYKR-EVQQTLENTPNLTIV 152

  Fly   150 DVLFKDIM--RDNHPARESASKAPAAPPPGALPLSVD----LHGRHNVQPESKFDACRLHGTLGI 208
            :...:||:  .|:...|.:..|........|..|.:.    |.|:.|:..|:             
Mosquito   153 EASVEDIVLSEDSEQPRLAGVKLADGRTMTADSLVITTGTFLRGQINIGLET------------- 204

  Fly   209 NKVAGVLHLVGGAQPVVGLFE--DHWMIELRRMPANFTHRINR 249
             :.||.:    |.:|.:||.:  :.....|.|:......||:|
Mosquito   205 -RPAGRI----GDEPAIGLAKSIEELGFRLGRLKTGTPPRIHR 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4293NP_569847.1 ERGIC_N 19..106 CDD:464000 5/17 (29%)
COPIIcoated_ERV <200..349 CDD:462327 11/52 (21%)
LOC1269566XP_308209.5 None

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