Protein Alignment elav and elavl3

DIOPT Version :9

• Sequence 1: NP_001245447.1
• Gene: elav / 31000
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Sequence 2: XP_012808614.1
• Gene: elavl3 / 594912
• XenbaseID: XB-GENE-490864
• Length: 363
• Species: Xenopus tropicalis
• Alignment Length: 388
• Identity: 196/388 - (50%)
• Similarity: 251/388 - (64%)
• Gaps: 50/388 - (12%)

  Fly   114 VQQAVVPQPQQAQPNTNGNAGSGSQNGSNGST-ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIES 177
            |.|.:.....||   :||....|..||:||:. :::||||||||||.||::|.:|||.|:|||||
 Frog     2 VTQIISTMETQA---SNGPGSVGILNGTNGAADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIES 63

  Fly   178 VKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSS 242
            .||:|||             ..||||||||||||.|.||::|:|.||||:||.||||||:|||||
 Frog    64 CKLVRDK-------------ITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSS 115

  Fly   243 DAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAI 307
            .:|:.||||||.|||||.|:|:|.:|:.:|.|||||||.:....:.::||||||||||.||..||
 Frog   116 ASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAI 180

  Fly   308 IALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGAMH-------------- 358
            ..|||..|...::||.|||:|.|   |:.....|...|.....||..|.:|
 Frog   181 KGLNGQKPLGASEPITVKFANNP---SQKTGQALLTHLYQTTARRYTGPLHHQTQRFRLDSLINM 242

  Fly   359 -----TPVNKGLARFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAAL 418
                 :|:: .|.||||:..|    .:.|..|.:....||      ..:.||:|||:||.:|:.|
 Frog   243 AYGVKSPLS-FLPRFSPITID----SVTNLAGVSLTGPTT------AGWCIFVYNLSPEADESVL 296

  Fly   419 WQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 481
            ||||||||||.:||:::|.|||:|||:|||:|||||||||||.:||||.:|:|||||||||:|
 Frog   297 WQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elav	NP_001245447.1	ELAV_HUD_SF	146..483	CDD:273741	185/355 (52%)
elavl3	XP_012808614.1	ELAV_HUD_SF	32..362	CDD:273741	185/355 (52%)
		RRM1_Hu	34..111	CDD:241094	56/89 (63%)
		RRM_SF	116..206	CDD:302621	50/92 (54%)
		RRM3_HuC	279..363	CDD:241099	57/81 (70%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55893
OrthoDB	1	1.010	-	-		D425303at33208
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10352
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X326
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	7.030