Protein Alignment elav and Elavl1

DIOPT Version :9

• Sequence 1: NP_001245447.1
• Gene: elav / 31000
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Sequence 2: NP_001102318.1
• Gene: Elavl1 / 363854
• RGDID: 1308649
• Length: 326
• Species: Rattus norvegicus
• Alignment Length: 341
• Identity: 180/341 - (52%)
• Similarity: 234/341 - (68%)
• Gaps: 41/341 - (12%)

  Fly   148 RTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVR 212
            |||||||||||.||::|:||||||:||:||.||||||             ..|.||||||||||.
  Rat    19 RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDK-------------VAGHSLGYGFVNYVT 70

  Fly   213 PQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITS 277
            .:|||:|::.|||||||:||||||:|||||:.||.||||:||||:||||:::|.:|:.||.||.|
  Rat    71 AKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135

  Fly   278 RIL--QNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKI-IQP 339
            |:|  |..|   .::||.|||||||.||..||.:.||..|...::||.|||:..|.....: :..
  Rat   136 RVLVDQTTG---LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMALLS 197

  Fly   340 QLPAFLNPQLVRRIGGAMHTPVNKGLARFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGA--- 401
            ||  :.:|  .||.||.:|....:  .|||||..|.:     :|:..        .:.||.|
  Rat   198 QL--YHSP--ARRFGGPVHHQAQR--FRFSPMGVDHM-----SGISG--------VNVPGNASSG 243

  Fly   402 YPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGY 466
            :.||||||..:.:|..|||:|||||||.:||:::|..||:|||:|||:||||:||||||.:||||
  Rat   244 WCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGY 308

  Fly   467 TMGNRVLQVSFKTNKA 482
            .:|:::|||||||||:
  Rat   309 RLGDKILQVSFKTNKS 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elav	NP_001245447.1	ELAV_HUD_SF	146..483	CDD:273741	180/341 (53%)
Elavl1	NP_001102318.1	ELAV_HUD_SF	19..326	CDD:273741	180/341 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0145
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55893
OrthoDB	1	1.010	-	-		D425303at33208
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10352
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X326
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	10	9.890