Protein Alignment elav and Elavl1

DIOPT Version :10

• Sequence 1: NP_525033.1
• Gene: elav / 31000
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Sequence 2: NP_001102318.1
• Gene: Elavl1 / 363854
• RGDID: 1308649
• Length: 326
• Species: Rattus norvegicus
• Alignment Length: 341
• Identity: 180/341 - (52%)
• Similarity: 234/341 - (68%)
• Gaps: 41/341 - (12%)

  Fly   148 RTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVR 212
            |||||||||||.||::|:||||||:||:||.||||||             ..|.||||||||||.
  Rat    19 RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDK-------------VAGHSLGYGFVNYVT 70

  Fly   213 PQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITS 277
            .:|||:|::.|||||||:||||||:|||||:.||.||||:||||:||||:::|.:|:.||.||.|
  Rat    71 AKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 135

  Fly   278 RIL--QNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKI-IQP 339
            |:|  |..|   .::||.|||||||.||..||.:.||..|...::||.|||:..|.....: :..
  Rat   136 RVLVDQTTG---LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMALLS 197

  Fly   340 QLPAFLNPQLVRRIGGAMHTPVNKGLARFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGA--- 401
            ||  :.:|  .||.||.:|....:  .|||||..|.:     :|:..        .:.||.|
  Rat   198 QL--YHSP--ARRFGGPVHHQAQR--FRFSPMGVDHM-----SGISG--------VNVPGNASSG 243

  Fly   402 YPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGY 466
            :.||||||..:.:|..|||:|||||||.:||:::|..||:|||:|||:||||:||||||.:||||
  Rat   244 WCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGY 308

  Fly   467 TMGNRVLQVSFKTNKA 482
            .:|:::|||||||||:
  Rat   309 RLGDKILQVSFKTNKS 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elav	NP_525033.1	ELAV_HUD_SF	146..483	CDD:273741	180/341 (53%)
Elavl1	NP_001102318.1	ELAV_HUD_SF	19..326	CDD:273741	180/341 (53%)