Protein Alignment elav and Elavl2

DIOPT Version :9

• Sequence 1: NP_001245447.1
• Gene: elav / 31000
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Sequence 2: NP_001289146.1
• Gene: Elavl2 / 286973
• RGDID: 628611
• Length: 388
• Species: Rattus norvegicus
• Alignment Length: 370
• Identity: 198/370 - (53%)
• Similarity: 250/370 - (67%)
• Gaps: 47/370 - (12%)

  Fly   127 PNT-NGNAGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYID 190
            |.| |.|..|...:|:  :.:::||||||||||.||::|::|||.|:|||||.||:|||
  Rat    47 PTTVNNNCSSPVDSGN--TEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDK------ 103

  Fly   191 PLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGL 255
                   ..|||||||||||:.|:|||:|:|.|||||||.||||||:|||||.:|:.||||||||
  Rat   104 -------ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGL 161

  Fly   256 PKTMTQQELEAIFAPFGAIITSRIL--QNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSC 318
            ||||||:|||.:|:.:|.|||||||  |..|   .::||||||||||.||..||..|||..|...
  Rat   162 PKTMTQKELEQLFSQYGRIITSRILVDQVTG---ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGA 223

  Fly   319 TDPIVVKFSNTPG-STSKIIQPQLPAFLNPQLVRRIGGAMHTPVNK-----------GLARFSPM 371
            |:||.|||:|.|. .|::.|..||  :.:|.  ||..|.:.....:           |:.|||||
  Rat   224 TEPITVKFANNPSQKTNQAILSQL--YQSPN--RRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPM 284

  Fly   372 AGDMLDVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKD 436
            ..|          |..:.|...:...||..:.||:|||||:.:|:.|||:|||||||.:||:::|
  Rat   285 TID----------GMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRD 339

  Fly   437 PTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 481
            ..||:|||:|||:|||||||||||.:||||.:|:|||||||||||
  Rat   340 FNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 384

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elav	NP_001245447.1	ELAV_HUD_SF	146..483	CDD:273741	192/350 (55%)
Elavl2	NP_001289146.1	ELAV_HUD_SF	65..387	CDD:273741	192/350 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0145
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55893
OrthoDB	1	1.010	-	-		D425303at33208
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10352
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X326
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	10	9.890