Protein Alignment elav and Elavl3

DIOPT Version :9

• Sequence 1: NP_001245447.1
• Gene: elav / 31000
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Sequence 2: NP_758827.1
• Gene: Elavl3 / 282824
• RGDID: 628892
• Length: 367
• Species: Rattus norvegicus
• Alignment Length: 376
• Identity: 196/376 - (52%)
• Similarity: 248/376 - (65%)
• Gaps: 53/376 - (14%)

  Fly   131 GNAGSGSQN----GSNGST-ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYID 190
            |.||....|    |:||:| :::||||||||||.||:||.:|||.|:|:|||.||:|||
  Rat    16 GPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDK------ 74

  Fly   191 PLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGL 255
                   ..|||||||||||..|.||::|:|.||||:||.||||||:|||||.:|:.||||||||
  Rat    75 -------ITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGL 132

  Fly   256 PKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTD 320
            ||||:|:|:|.:|:.:|.|||||||.:..... ::||||||||||.||..||..|||..|....:
  Rat   133 PKTMSQKEMEQLFSQYGRIITSRILLDQATGV-SRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAE 196

  Fly   321 PIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGAMH-------------------TPVNKGLA 366
            ||.|||:|.|   |:.....|...|.....||..|.:|                   :|::. :|
  Rat   197 PITVKFANNP---SQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSL-IA 257

  Fly   367 RFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGA-YPIFIYNLAPETEEAALWQLFGPFGAVQS 430
            ||||:|.|          |.:..|...|:.|..|| :.||:|||:||.:|:.|||||||||||.:
  Rat   258 RFSPIAID----------GMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTN 312

  Fly   431 VKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 481
            ||:::|.|||:|||:|||:|||||||||||.:||||.:|.|||||||||:|
  Rat   313 VKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elav	NP_001245447.1	ELAV_HUD_SF	146..483	CDD:273741	188/356 (53%)
Elavl3	NP_758827.1	ELAV_HUD_SF	36..366	CDD:273741	188/356 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0145
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55893
OrthoDB	1	1.010	-	-		D425303at33208
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10352
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X326
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	10	9.890