DRSC/TRiP Functional Genomics Resources

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Protein Alignment elav and RBMS3

DIOPT Version :10

Sequence 1:NP_525033.1 Gene:elav / 31000 FlyBaseID:FBgn0260400 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001003793.1 Gene:RBMS3 / 27303 HGNCID:13427 Length:437 Species:Homo sapiens


Alignment Length:355 Identity:93/355 - (26%)
Similarity:144/355 - (40%) Gaps:90/355 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 QQAVVPQPQ-QAQPNTNGNAGS-GSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIES 177
            :|:..|.|. .|.|:.:.|:.| .|.|.|:|...::|||.:..||...|:.::..|....|:|.|
Human    25 KQSYAPAPHPMAPPSPSTNSSSNNSSNNSSGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVS 89

  Fly   178 VKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSS 242
            .|.|.||             :..|..|||||::..|..|::||..|....:|.:..|.....|: 
Human    90 TKAILDK-------------NTNQCKGYGFVDFDSPAAAQKAVASLKANGVQAQMAKQQEQDPT- 140

  Fly   243 DAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAI 307
                  |||:|.||.:|.:||||.:..|||.:|::|||::|..  .::||||.|.:..|:....|
Human   141 ------NLYISNLPISMDEQELENMLKPFGHVISTRILRDANG--VSRGVGFARMESTEKCEVVI 197

  Fly   308 IALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGAMHTPVNK--------- 363
            ...||            |:..||        |.:||...|.|.:...|......|:         
Human   198 QHFNG------------KYLKTP--------PGIPAPSEPLLCKFADGGQKKRQNQSKYTQNGRP 242

  Fly   364 -------GLA-RFSPMAGDMLDVMLPNGLGAAAAAATT------------LASGPGGAYPIFIYN 408
                   |:| .:.|.|.      :.||..::..:..|            :|:.|...|.:    
Human   243 WPREGEAGMALTYDPTAA------IQNGFYSSPYSIATNRMIPQTSITPFIAASPVSTYQV---- 297

  Fly   409 LAPETEEAALWQLFGPFGAVQSVKIVKDPT 438
                  ::..|....|: .:|....|..||
Human   298 ------QSTSWMPHPPY-VMQPTGAVITPT 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elavNP_525033.1 ELAV_HUD_SF 146..483 CDD:273741 82/322 (25%)
RBMS3NP_001003793.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..57 10/28 (36%)
RRM1_RBMS3 57..136 CDD:409902 27/91 (30%)
RRM2_RBMS3 139..226 CDD:240919 37/115 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 399..437
Blue background indicates that the domain is not in the aligned region.

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