DRSC/TRiP Functional Genomics Resources

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Protein Alignment elav and ELAVL4

DIOPT Version :9

Sequence 1:NP_001245447.1 Gene:elav / 31000 FlyBaseID:FBgn0260400 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_011539191.1 Gene:ELAVL4 / 1996 HGNCID:3315 Length:416 Species:Homo sapiens


Alignment Length:399 Identity:200/399 - (50%)
Similarity:254/399 - (63%) Gaps:67/399 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 QPQQAQPNTNGNAGSGSQNGSN-------GST--ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIE 176
            :||.:...|:..:...|.|..|       |:|  :::||||||||||.||::|.||||.|:||||
Human    45 EPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIE 109

  Fly   177 SVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPS 241
            |.||:|||             ..|||||||||||:.|:|||:|:|.|||||||.||||||:||||
Human   110 SCKLVRDK-------------ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPS 161

  Fly   242 SDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRIL--QNAGNDTQTKGVGFIRFDKREEAT 304
            |.:|:.||||||||||||||:|||.:|:.:|.|||||||  |..|   .::||||||||||.||.
Human   162 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG---VSRGVGFIRFDKRIEAE 223

  Fly   305 RAIIALNGTTPSSCTDPIVVKFSNTPG-STSKIIQPQLPAFLNPQLVRRIGGAMH---------- 358
            .||..|||..||..|:||.|||:|.|. .:|:.:..||  :.:|.  ||..|.:|          
Human   224 EAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--YQSPN--RRYPGPLHHQAQRFRLDN 284

  Fly   359 ---------------TPVNKGLARFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGAYPIFIYN 408
                           .|.:....||||:..|          |..:.....:....|..:.||:||
Human   285 LLNMAYGVKRLMSGPVPPSACPPRFSPITID----------GMTSLVGMNIPGHTGTGWCIFVYN 339

  Fly   409 LAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVL 473
            |:|:::|:.|||||||||||.:||:::|..||:|||:|||:|||||||||||.:||||.:|:|||
Human   340 LSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 404

  Fly   474 QVSFKTNKA 482
            |||||||||
Human   405 QVSFKTNKA 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elavNP_001245447.1 ELAV_HUD_SF 146..483 CDD:273741 192/365 (53%)
ELAVL4XP_011539191.1 ELAV_HUD_SF 79..415 CDD:273741 192/365 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0145
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55893
OrthoDB 1 1.010 - - D425303at33208
OrthoFinder 1 1.000 - - FOG0000313
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10352
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X326
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
98.890

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