DRSC/TRiP Functional Genomics Resources

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Protein Alignment elav and ELAVL1

DIOPT Version :10

Sequence 1:NP_525033.1 Gene:elav / 31000 FlyBaseID:FBgn0260400 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_047294339.1 Gene:ELAVL1 / 1994 HGNCID:3312 Length:353 Species:Homo sapiens


Alignment Length:341 Identity:183/341 - (53%)
Similarity:234/341 - (68%) Gaps:41/341 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 RTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVR 212
            |||||||||||.||:||:||||||:||:||.||||||             ..|.||||||||||.
Human    46 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDK-------------VAGHSLGYGFVNYVT 97

  Fly   213 PQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITS 277
            .:|||:|:|.|||||||:||||||:|||||:.||.||||:||||:||||:::|.:|:.||.||.|
Human    98 AKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINS 162

  Fly   278 RIL--QNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKI-IQP 339
            |:|  |..|   .::||.|||||||.||..||.:.||..|...::||.|||:..|.....: :..
Human   163 RVLVDQTTG---LSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNVALLS 224

  Fly   340 QLPAFLNPQLVRRIGGAMHTPVNKGLARFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGA--- 401
            ||  :.:|  .||.||.:|....:  .|||||..|.:     :||..        .:.||.|   
Human   225 QL--YHSP--ARRFGGPVHHQAQR--FRFSPMGVDHM-----SGLSG--------VNVPGNASSG 270

  Fly   402 YPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGY 466
            :.||||||..:.:|..|||:|||||||.:||:::|..||:|||:|||:||||:||||||.:||||
Human   271 WCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGY 335

  Fly   467 TMGNRVLQVSFKTNKA 482
            .:|:::|||||||||:
Human   336 RLGDKILQVSFKTNKS 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elavNP_525033.1 ELAV_HUD_SF 146..483 CDD:273741 183/341 (54%)
ELAVL1XP_047294339.1 ELAV_HUD_SF 46..353 CDD:273741 183/341 (54%)

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