Sequence 1: | NP_001245447.1 | Gene: | elav / 31000 | FlyBaseID: | FBgn0260400 | Length: | 483 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_494441.1 | Gene: | copb-1 / 173656 | WormBaseID: | WBGene00021292 | Length: | 971 | Species: | Caenorhabditis elegans |
Alignment Length: | 251 | Identity: | 48/251 - (19%) |
---|---|---|---|
Similarity: | 82/251 - (32%) | Gaps: | 86/251 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 GVDTQ--------AQLMQSAAAAAAVAATNAAAAPVQNAAAVAAAAQLQQQQVQ--------QAI 61
Fly 62 LQVQQQ-------QTQQAVAAAAAAVTQQLQQQQQAVVAQ----------QAVVQQQQ------- 102
Fly 103 ---QQAAAVVQQAAVQQAVV--------PQPQQAQPNTNGNAG-----SGSQNG---------SN 142
Fly 143 GSTETRTNL--------IVNYL-PQTMTEDEIRSLFS------SVGEIESVKLIRD 183 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
elav | NP_001245447.1 | ELAV_HUD_SF | 146..483 | CDD:273741 | 11/53 (21%) |
copb-1 | NP_494441.1 | COG5096 | 31..935 | CDD:227427 | 48/251 (19%) |
HEAT repeat | 138..162 | CDD:293787 | |||
HEAT repeat | 174..222 | CDD:293787 | |||
HEAT repeat | 245..275 | CDD:293787 | |||
HEAT repeat | 284..308 | CDD:293787 | |||
HEAT repeat | 319..343 | CDD:293787 | |||
Coatamer_beta_C | 677..816 | CDD:285019 | 23/138 (17%) | ||
Coatomer_b_Cpla | 825..953 | CDD:291472 | 10/49 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S39 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.950 |