DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment svr and Cpn1

DIOPT Version :9

Sequence 1:NP_001284744.1 Gene:svr / 30998 FlyBaseID:FBgn0004648 Length:1439 Species:Drosophila melanogaster
Sequence 2:XP_011245709.1 Gene:Cpn1 / 93721 MGIID:2135874 Length:463 Species:Mus musculus


Alignment Length:419 Identity:188/419 - (44%)
Similarity:252/419 - (60%) Gaps:45/419 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 FLTPTKYEHHNFTAMESYLRAISSSYPSLTRLYSIGKSVQGRDLWVLEIFATPGSHVPGVPEFKY 512
            |:||..:.||.:..:...|..:.:..|.:||||:||:||:||.|:|||....||.|.|..||.||
Mouse    17 FVTPVTFRHHRYDDLVRTLYKVHNQCPDITRLYNIGRSVKGRYLYVLEFSDYPGIHEPLEPEVKY 81

  Fly   513 VANMHGNEVVGKELLLILTKYMLERYGN-DDRITKLVNGTRMHFLYSMNPDGYEISI-------E 569
            |.|||||||:|:||||.|::::.|.:.| :.||.:|:..||:|.|.||||||||::.       |
Mouse    82 VGNMHGNEVLGRELLLQLSEFLCEEFRNRNQRILRLIQDTRIHILPSMNPDGYEVAAAQVHSPRE 146

  Fly   570 GDRTGG--VGRANAHGIDLNRNFPD-----QYGT------------DRFNKVTEPEVAAVMNWTL 615
            |....|  |||.||:|:||||||||     .|.:            |.:....|||..||:.|..
Mouse   147 GPNMSGYLVGRNNANGVDLNRNFPDLNTYFYYNSKNGGPNHHLPLPDNWKSQVEPETRAVIQWIR 211

  Fly   616 SLPFVLSANLHGGSLVANYPFDDN-ENDFNDPFMRLRNSSINGRKPNPTEDNALFKHLAGIYSNA 679
            ||.||||||:|||::|||||:|.: |:.|..|. |..||        ||.|:.||:.||.:||.|
Mouse   212 SLNFVLSANMHGGAVVANYPYDKSLEHRFRGPH-RTSNS--------PTPDDELFQTLAKVYSYA 267

  Fly   680 HPTMYLGQPCELFQNEFFPDGITNGAQWYSVTGGMQDWNYVRAGCLELTIEMGCDKFPKAAELSR 744
            |..|:.|..|    .::|||||||||.|||::.||||:||:...|.|:|:|:.|||||:..||.|
Mouse   268 HGWMHQGWNC----GDYFPDGITNGASWYSLSKGMQDFNYLHTNCFEITLELSCDKFPRQEELQR 328

  Fly   745 YWEDHREPLLQFIEQVHCGIHGFVHSTIGTPIAGAVVRLDGANHSTYSQVFGDYWKLALPGRHNL 809
            .|..:||.|:||:||||.||.|.|.......:.|||:.:.|.||...|...|||::|.|||.:::
Mouse   329 EWLGNREALIQFLEQVHQGIKGMVLDENSNNLTGAVISVTGINHDVTSGEHGDYFRLLLPGTYSV 393

  Fly   810 TVLGDNYAPLRMEVEV----PDVHPFEMR 834
            |.....|.|..:.|.|    |.|..|:::
Mouse   394 TAKAPGYDPKTVTVTVGPAGPTVVDFQLK 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svrNP_001284744.1 M14_CPD_I 40..334 CDD:199850
Peptidase_M14NE-CP-C_like 338..416 CDD:200604
M14_CP_N-E_like 456..759 CDD:199842 155/330 (47%)
Peptidase_M14NE-CP-C_like 763..839 CDD:200604 26/76 (34%)
CarbopepD_reg_2 1125..1202 CDD:290434
CarboxypepD_reg 1223..1301 CDD:290350
Cpn1XP_011245709.1 Peptidase_M14_like 25..343 CDD:386095 155/330 (47%)
Peptidase_M14NE-CP-C_like 347..421 CDD:200604 26/73 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I10946
eggNOG 1 0.900 - - E1_KOG2649
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101221at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11532
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3496
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.950

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