DRSC/TRiP Functional Genomics Resources

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Protein Alignment svr and aebp1a

DIOPT Version :10

Sequence 1:NP_996319.1 Gene:svr / 30998 FlyBaseID:FBgn0004648 Length:1439 Species:Drosophila melanogaster
Sequence 2:NP_001311338.1 Gene:aebp1a / 793308 ZFINID:ZDB-GENE-030131-2390 Length:1022 Species:Danio rerio


Alignment Length:570 Identity:183/570 - (32%)
Similarity:260/570 - (45%) Gaps:122/570 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 VRVTNDNQEALRLDFKLAPVETNFDGNFRK---VKVERSEPP-----QKLKKQFNGFL------- 449
            |..:||::|...|....|  |..|.||..|   |..|.|.|.     :.|.:.:||.|       
Zfish   394 VAFSNDSREWTVLHDGYA--EWLFYGNVDKDTPVMTEFSYPVVARYIRVLPQSWNGSLCMRLEVL 456

  Fly   450 ---TPTK--------------YEHHNFTAMESYLRAISSSYPSLTRLYSIGKSVQGRDLWVLEIF 497
               .||.              |.|||:..|...::.|:...|::||:|:||||.||..::.:||.
Zfish   457 GCQLPTSYATENDVPPTDDLDYRHHNYKEMRQMMKVINEECPNITRIYNIGKSFQGLKMYAMEIS 521

  Fly   498 ATPGSHVPGVPEFKYVANMHGNEVVGKELLLILTKYMLERYGNDD-RITKLVNGTRMHFLYSMNP 561
            ..||.|.||.|||:|.|.:|||||:|:||||:|.:::.:.|.:|: |:.:||...|:|.:.|:||
Zfish   522 DNPGEHEPGEPEFRYTAGLHGNEVLGRELLLLLMQFICKEYNDDNPRVHRLVETVRIHLVPSLNP 586

  Fly   562 DGYEISIE-GDRTG--GVGRANAHGIDLNRNFPD----QYGT-DR------------------FN 600
            |.||::.| |...|  .:|.....|.|:.:||||    .:|. ||                  .|
Zfish   587 DAYELAYEMGSEMGNWALGHWTEEGYDIFQNFPDLNSVLWGAEDRGWVPRIVPNHHIPIPENFLN 651

  Fly   601 KVTEPEVAAVMNWTLSLPFVLSANLHGGSLVANYPFDDNENDFNDPFMRLRNSSINGRKPNP--- 662
            .....|..|:::|....||||.|||.||..:..||||.....        |.:|.:||...|   
Zfish   652 GSVATETKAIISWMERTPFVLGANLQGGEKLVAYPFDMQRPP--------RATSTDGRVGQPVQE 708

  Fly   663 ----------------------TEDNALFKHLAGIYSNAHPTMYLGQPCELFQNEFFPDGITNG- 704
                                  |.|..||:.||..|:::|.|:     .|..:.....|.||.| 
Zfish   709 YHNMNEETWARIQRQNEGALRETADENLFRWLATTYAHSHLTL-----TENHRGSCHTDDITGGQ 768

  Fly   705 -----AQWYSVTGGMQDWNYVRAGCLELTIEMGCDKFPKAAELSRYWEDHREPLLQFIEQVHCGI 764
                 |.|..|.|.|.|::|:...|.|::|.:||||||..:||...||::||.||.||||||.||
Zfish   769 GIINRASWKPVVGSMNDFSYLHTNCFEISIFLGCDKFPHESELPSEWENNREALLAFIEQVHRGI 833

  Fly   765 HGFVHSTIGTPIAGAVVRLDGANHSTYSQVFGDYWKLALPGRHNLTVLGDNY-APLRMEVEVPDV 828
            .|.|....|..:|.|.|.::|..|...:...||||:|..||.:.:|...|.| :..|:.:...|.
Zfish   834 KGVVRDVDGNLLANATVSVEGIKHDVKTASTGDYWRLLNPGEYRVTARADGYSSQTRLCIVGYDA 898

  Fly   829 HPFEMRMDITLMPDDPQHWA--------SANDFRIIENVVNTRYHTNPQV 870
            :.......:|     ..:||        |....|::.|:..   :.|.||
Zfish   899 NATPCSFTLT-----KSNWARIQQILAQSGKRPRLVNNIPR---NANNQV 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svrNP_996319.1 M14_CPD_I 40..334 CDD:349440
Peptidase_M14NE-CP-C_like 338..416 CDD:200604 5/15 (33%)
M14_CP_N-E_like 456..759 CDD:349431 126/360 (35%)
Peptidase_M14NE-CP-C_like 763..839 CDD:200604 22/76 (29%)
Peptidase_M14NE-CP-C_like 1124..1190 CDD:473874
CarboxypepD_reg 1223..1301 CDD:433354
aebp1aNP_001311338.1 FA58C 304..457 CDD:238014 19/64 (30%)
Peptidase_M14_like 480..828 CDD:472171 126/360 (35%)
Peptidase_M14NE-CP-C_like 832..907 CDD:200604 22/74 (30%)
Blue background indicates that the domain is not in the aligned region.

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