DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment svr and Cpxm2

DIOPT Version :9

Sequence 1:NP_001284744.1 Gene:svr / 30998 FlyBaseID:FBgn0004648 Length:1439 Species:Drosophila melanogaster
Sequence 2:NP_061355.3 Gene:Cpxm2 / 55987 MGIID:1926006 Length:764 Species:Mus musculus


Alignment Length:584 Identity:177/584 - (30%)
Similarity:260/584 - (44%) Gaps:149/584 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 SFSGGITNGAH-WYELSGGMQDFNYAFSNCFELTIELSCCKYPAASTL----PQEWQRNKASLLQ 330
            |:...::|.:| |..:..|..|..:..::..|:.: |:....|..:..    ||.|..|.:..::
Mouse   232 SYKVMVSNDSHTWVTVKNGSGDMIFEGNSEKEIPV-LNELPVPMVARYIRINPQSWFDNGSICMR 295

  Fly   331 LLRQAHIGIKGLVTDASGFPIADANVYVAGLEEKPMRTSKRGEYWRLLTPGLYSVHASAFGYQTS 395
            :             :..|.|:.|.|.|                |.|                   
Mouse   296 M-------------EILGC
PLPDPNNY----------------YHR------------------- 312

  Fly   396 APQQVRVTNDNQEALRLDFKLAPVETNFDGNFRKVKVERSEPPQKLKKQFNGFLTPTKYEHHNFT 460
             ..::..|:|      ||||                                        |||:.
Mouse   313 -RNEMTTTDD------LDFK----------------------------------------HHNYK 330

  Fly   461 AMESYLRAISSSYPSLTRLYSIGKSVQGRDLWVLEIFATPGSHVPGVPEFKYVANMHGNEVVGKE 525
            .|...::.::...|::||:|:||||.||..|:.:||...||.|..|.|||.|:|..|||||:|:|
Mouse   331 EMRQLMKVVNEMCPNITRIYNIGKSHQGLKLYAVEISDHPGEHEVGEPEFHYIAGAHGNEVLGRE 395

  Fly   526 LLLILTKYMLERY-GNDDRITKLVNGTRMHFLYSMNPDGYEISIE-GDRTGG--VGRANAHGIDL 586
            |||:|..::.:.| ..:.||.:||..||:|.|.|:||||||.:.| |...||  :||....|||:
Mouse   396 LLLLLLHFLCQEYSAQNARIVRLVEETRIHILPSLNPDGYEKAYEGGSELGGWSLGRWTHDGIDI 460

  Fly   587 NRNFP----------DQYGTDR---------------FNKVTEPEVAAVMNWTLSLPFVLSANLH 626
            |.|||          ||....|               .|.....|..||:.|...:||||..||.
Mouse   461 NNNFPDLNSLLWEAEDQQNAPRKVPNHYIAIPEWFLSENATVATETRAVIAWMEKIPFVLGGNLQ 525

  Fly   627 GGSLVANYPFDDNENDFNDPFMRLRNSSINGRKPNPTEDNALFKHLAGIYSNAHPTM--YLGQPC 689
            ||.||..||:|            :..|....::..||.|:.:|:.||..|::.|..|  ...:.|
Mouse   526 GGELVVAYPYD------------MVRSLWKTQEHTPTPDDHVFRWLAYSYASTHRLMTDARRRVC 578

  Fly   690 --ELFQNEFFPDGITNGAQWYSVTGGMQDWNYVRAGCLELTIEMGCDKFPKAAELSRYWEDHREP 752
              |.||.|   :|..|||.|::|.|.:.|::|:...|.||:|.:||||:|..:||...||::||.
Mouse   579 HTEDFQKE---EGTVNGASWHTVAGSLNDFSYLHTNCFELSIYVGCDKYPHESELPEEWENNRES 640

  Fly   753 LLQFIEQVHCGIHGFVHSTIGTPIAGAVVRLDGANHSTYSQVFGDYWKLALPGRHNLTVLGDNY 816
            |:.|:||||.||.|.|....|..|:.||:.::|.||...:...||||:|..||.:.:|...:.:
Mouse   641 LIVFMEQVHRGIKGIVRDLQGKGISNAVISVEGVNHDIRTASDGDYWRLLNPGEYVVTAKAEGF 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svrNP_001284744.1 M14_CPD_I 40..334 CDD:199850 13/67 (19%)
Peptidase_M14NE-CP-C_like 338..416 CDD:200604 12/77 (16%)
M14_CP_N-E_like 456..759 CDD:199842 128/335 (38%)
Peptidase_M14NE-CP-C_like 763..839 CDD:200604 19/54 (35%)
CarbopepD_reg_2 1125..1202 CDD:290434
CarboxypepD_reg 1223..1301 CDD:290350
Cpxm2NP_061355.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 71..136
FA58C 145..300 CDD:238014 13/81 (16%)
FA58C 146..301 CDD:214572 13/82 (16%)
M14_CPX_like 322..647 CDD:199851 132/379 (35%)
Peptidase_M14NE-CP-C_like 651..726 CDD:200604 19/54 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 62 1.000 Domainoid score I10282
eggNOG 1 0.900 - - E1_KOG2649
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101221at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11532
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.