DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment svr and cpz

DIOPT Version :10

Sequence 1:NP_996319.1 Gene:svr / 30998 FlyBaseID:FBgn0004648 Length:1439 Species:Drosophila melanogaster
Sequence 2:XP_073809057.1 Gene:cpz / 557534 ZFINID:ZDB-GENE-090313-267 Length:681 Species:Danio rerio


Alignment Length:454 Identity:178/454 - (39%)
Similarity:242/454 - (53%) Gaps:64/454 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   447 GFLTPTKYEHHNFTAMESYLRAISSSYPSLTRLYSIGKSVQGRDLWVLEIFATPGSHVPGVPEFK 511
            |..|..::.:|:.:.|.|.|:..:|....:::.||||:||:|:||.|:|....||.|....||.|
Zfish   196 GLSTVIQFTYHSNSQMFSILKKTASKCSHISQTYSIGRSVEGKDLLVIEFSNNPGQHDLLEPEIK 260

  Fly   512 YVANMHGNEVVGKELLLILTKYMLERY--GNDDRITKLVNGTRMHFLYSMNPDGYEISI------ 568
            .:.|||||||:|::||:.|.:|:...|  || :||..::|.||:|.|.|||||||||:.      
Zfish   261 LIGNMHGNEVLGRQLLIYLAQYLCSEYLLGN-ERIQTIINTTRIHILASMNPDGYEIAASEVADR 324

  Fly   569 --------EGDRTGG--VGRANAHGIDLNRNFPDQ----YGTDRF----------------NKVT 603
                    ||....|  .|||||..:||||||||.    |...||                |||.
Zfish   325 NDPENIYQEGHEYNGWTSGRANAQNLDLNRNFPDLTSIFYNRRRFRHFRSDHIPIPDSYWMNKVV 389

  Fly   604 EPEVAAVMNWTLSLPFVLSANLHGGSLVANYPFDDNENDFNDPFMRLRNSSINGRKPNPTEDNAL 668
            .||..|:|.|..:.|||:||:||||.||.:||||.:.:...|            |..:||.|..:
Zfish   390 APETYAIMKWIRTYPFVISASLHGGELVISYPFDFSRHPQED------------RMYSPTPDEQI 442

  Fly   669 FKHLAGIYSNAHPTMYLG--QPC-ELFQNEFFPDGITNGAQWYSVTGGMQDWNYVRAGCLELTIE 730
            |:.||..|::||.||...  :.| ..|.|:   .||||||.|||..|||.|:||:.:.|.|:|:|
Zfish   443 FRQLARTYADAHATMSNNDTERCGASFANK---GGITNGALWYSFAGGMSDFNYLHSNCYEITVE 504

  Fly   731 MGCDKFPKAAELSRYWEDHREPLLQFIEQVHCGIHGFVHSTIGTPIAGAVVRLDGANHSTYSQVF 795
            :||||||...||...|..::|.||.|:|.||.||.|.|....|..|.||::.:.|..|...:...
Zfish   505 LGCDKFPSEEELYPEWRRNKEALLSFMESVHKGIKGIVKDEHGNGIKGAIISVKGLRHDITTAED 569

  Fly   796 GDYWKLALPGRHNLTVLGDNYAPLRMEVEVPDVHPFEMRMDITL--MPDDPQHWASANDFRIIE 857
            ||||:|..||.|.:|.....|:.....:.:|. :....|:|..|  :|.:|    |.:.|.|.|
Zfish   570 GDYWRLMNPGVHIVTASASGYSKQSKRINLPR-NTQVGRVDFVLKKVPREP----SLDYFNIPE 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svrNP_996319.1 M14_CPD_I 40..334 CDD:349440
Peptidase_M14NE-CP-C_like 338..416 CDD:200604
M14_CP_N-E_like 456..759 CDD:349431 143/343 (42%)
Peptidase_M14NE-CP-C_like 763..839 CDD:200604 23/75 (31%)
Peptidase_M14NE-CP-C_like 1124..1190 CDD:473874
CarboxypepD_reg 1223..1301 CDD:433354
cpzXP_073809057.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.