DRSC/TRiP Functional Genomics Resources

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Protein Alignment svr and cpn1

DIOPT Version :10

Sequence 1:NP_996319.1 Gene:svr / 30998 FlyBaseID:FBgn0004648 Length:1439 Species:Drosophila melanogaster
Sequence 2:NP_001017266.1 Gene:cpn1 / 550020 XenbaseID:XB-GENE-967670 Length:449 Species:Xenopus tropicalis


Alignment Length:382 Identity:167/382 - (43%)
Similarity:228/382 - (59%) Gaps:33/382 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 HHNFTAMESYLRAISSSYPSLTRLYSIGKSVQGRDLWVLEIFATPGSHVPGVPEFKYVANMHGNE 520
            ||.:..:...|..:.:..|.:||:||||:|||||.|:|:|....||.|....||||||.||||||
 Frog    25 HHRYDDLVRALYNVQNQCPYITRVYSIGRSVQGRHLYVIEFSDNPGIHELLEPEFKYVGNMHGNE 89

  Fly   521 VVGKELLLILTKYMLERY-GNDDRITKLVNGTRMHFLYSMNPDGYEISIEGDRTGG---VGRANA 581
            |:|:|||:.|.:::.|.| .|::|:|:|:..||:|.|.||||||||::.:....|.   .||.|.
 Frog    90 VLGRELLIQLAEFLCEEYRNNNERVTRLIQTTRIHILPSMNPDGYEVAADQGPEGNGYLTGRYNY 154

  Fly   582 HGIDLNRNFPD---------QYG--------TDRFNKVTEPEVAAVMNWTLSLPFVLSANLHGGS 629
            ..:||||||||         :||        .|.:....|||..|::.|..:..||||||||||:
 Frog   155 RQVDLNRNFPDLNTVMYYNEKYGGPNHHLPLPDNWMAQVEPETQAMIQWLKNYNFVLSANLHGGA 219

  Fly   630 LVANYPFDDNENDFNDPFMRLRNSSINGRKPNPTEDNALFKHLAGIYSNAHPTMYLGQPCELFQN 694
            :|||||:|.::......|.|...||        |.|:||||.||..||.||..|:.|..|:    
 Frog   220 VVANYPYDKSKEIRMRGFTRSTYSS--------TPDDALFKELAKTYSYAHGWMHTGYNCD---- 272

  Fly   695 EFFPDGITNGAQWYSVTGGMQDWNYVRAGCLELTIEMGCDKFPKAAELSRYWEDHREPLLQFIEQ 759
            :||.:||||||.|||:..||||:||:...|.|:|:|:.|||||:..||.:.|..:||.||.:|::
 Frog   273 DFFYEGITNGASWYSLYKGMQDFNYLHTNCFEITLELSCDKFPREEELEQEWNGNREALLTYIDK 337

  Fly   760 VHCGIHGFVHSTIGTPIAGAVVRLDGANHSTYSQVFGDYWKLALPGRHNLTVLGDNY 816
            ||.||.|.:....|..||.||:.:....|...|.:.|||::|.|||.:.:|...:.|
 Frog   338 VHQGIKGMITDENGNGIANAVISISEIAHDVTSGIGGDYFRLLLPGTYEVTASAEGY 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svrNP_996319.1 M14_CPD_I 40..334 CDD:349440
Peptidase_M14NE-CP-C_like 338..416 CDD:200604
M14_CP_N-E_like 456..759 CDD:349431 146/323 (45%)
Peptidase_M14NE-CP-C_like 763..839 CDD:200604 19/54 (35%)
Peptidase_M14NE-CP-C_like 1124..1190 CDD:473874
CarboxypepD_reg 1223..1301 CDD:433354
cpn1NP_001017266.1 Peptidase_M14_like 25..337 CDD:472171 146/323 (45%)
Peptidase_M14NE-CP-C_like 341..415 CDD:200604 19/54 (35%)
Blue background indicates that the domain is not in the aligned region.

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