DRSC/TRiP Functional Genomics Resources

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Protein Alignment svr and Cpn1

DIOPT Version :10

Sequence 1:NP_996319.1 Gene:svr / 30998 FlyBaseID:FBgn0004648 Length:1439 Species:Drosophila melanogaster
Sequence 2:NP_445978.1 Gene:Cpn1 / 365466 RGDID:70931 Length:457 Species:Rattus norvegicus


Alignment Length:417 Identity:188/417 - (45%)
Similarity:256/417 - (61%) Gaps:39/417 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 FLTPTKYEHHNFTAMESYLRAISSSYPSLTRLYSIGKSVQGRDLWVLEIFATPGSHVPGVPEFKY 512
            |:||..:.||.:..:...|..:.:..|.:||||:||:||:||.|:|||....||:|.|..||.||
  Rat    17 FVTPVTFRHHRYDDLVRTLYKVHNQCPDITRLYNIGRSVKGRYLYVLEFSDYPGTHEPLEPEVKY 81

  Fly   513 VANMHGNEVVGKELLLILTKYMLERYGN-DDRITKLVNGTRMHFLYSMNPDGYEI-SIEGDRTGG 575
            |.|||||||:|:||||.|::::.|.:.| :.||.:|:..||:|.|.||||||||: :.:|..|.|
  Rat    82 VGNMHGNEVLGRELLLQLSEFLCEEFRNRNQRILRLIQDTRIHILPSMNPDGYEVAAAQGPNTSG 146

  Fly   576 --VGRANAHGIDLNRNFPD---------QYG--------TDRFNKVTEPEVAAVMNWTLSLPFVL 621
              |||.||:|:||||||||         :||        .|.:....|||..||:.|..||.|||
  Rat   147 YLVGRNNANGVDLNRNFPDLNTYFYYNSKYGGPNHHLPLPDNWKSQVEPETRAVIQWIRSLNFVL 211

  Fly   622 SANLHGGSLVANYPFDDN-ENDFNDPFMRLRNSSINGRKPNPTEDNALFKHLAGIYSNAHPTMYL 685
            |||:|||::|||||:|.: |:.|..|. |..||        ||.|:.||:.||.:||.||..|:.
  Rat   212 SANMHGGAVVANYPYDKSLEHRFRSPH-RTSNS--------PTPDDELFQTLAKVYSYAHGWMHQ 267

  Fly   686 GQPCELFQNEFFPDGITNGAQWYSVTGGMQDWNYVRAGCLELTIEMGCDKFPKAAELSRYWEDHR 750
            |..|    .::|||||||||.|||::.||||:||:...|.|:|:|:.|:|||:..||.|.|..:|
  Rat   268 GWNC----GDYFPDGITNGASWYSLSKGMQDFNYLHTNCFEITLELSCNKFPRQEELQREWLGNR 328

  Fly   751 EPLLQFIEQVHCGIHGFVHSTIGTPIAGAVVRLDGANHSTYSQVFGDYWKLALPGRHNLTVLGDN 815
            |.|:||:||||.||.|.|.......:.|||:.:.|.||...|...|||::|.|||.:::|.....
  Rat   329 EALIQFLEQVHQGIKGMVLDENYNNLTGAVISVTGINHDVTSGEHGDYFRLLLPGTYSVTAKASG 393

  Fly   816 YAPLRMEVEV----PDVHPFEMRMDIT 838
            |.|..:.|.|    |.:..|:::...|
  Rat   394 YEPKTVTVTVGPAGPTLVDFQLKRSTT 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svrNP_996319.1 M14_CPD_I 40..334 CDD:349440
Peptidase_M14NE-CP-C_like 338..416 CDD:200604
M14_CP_N-E_like 456..759 CDD:349431 155/324 (48%)
Peptidase_M14NE-CP-C_like 763..839 CDD:200604 26/80 (33%)
Peptidase_M14NE-CP-C_like 1124..1190 CDD:473874
CarboxypepD_reg 1223..1301 CDD:433354
Cpn1NP_445978.1 Peptidase_M14_like 25..337 CDD:472171 155/324 (48%)
Peptidase_M14NE-CP-C_like 341..415 CDD:200604 25/73 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 418..457 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

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