DRSC/TRiP Functional Genomics Resources

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Protein Alignment svr and CG4678

DIOPT Version :9

Sequence 1:NP_001284744.1 Gene:svr / 30998 FlyBaseID:FBgn0004648 Length:1439 Species:Drosophila melanogaster
Sequence 2:NP_001138211.1 Gene:CG4678 / 32652 FlyBaseID:FBgn0030778 Length:527 Species:Drosophila melanogaster


Alignment Length:464 Identity:181/464 - (39%)
Similarity:267/464 - (57%) Gaps:64/464 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   454 YEHHNFTAMESYLRAISSSYPSLTRLYSIGKSVQGRDLWVLEIFATPGSHVPGVPEFKYVANMHG 518
            :.:|:...:..:|||.|:.||:||.|||||||:|||||||:.:.::|..|:.|.|:.|||.|:||
  Fly    70 FVYHDHEELTRFLRATSARYPNLTALYSIGKSIQGRDLWVMVVSSSPYEHMVGKPDVKYVGNIHG 134

  Fly   519 NEVVGKELLLILTKYMLERYGNDDRITKLVNGTRMHFLYSMNPDGYEISIEGDRTGGVGRANAHG 583
            ||.||:|:||.|.:|.:..|..|..:..|::.||:|.|.:||||||.:|.||...||.||.||.|
  Fly   135 NEPVGREMLLHLIQYFVTSYNTDQYVKWLLDNTRIHILPTMNPDGYAVSKEGTCDGGQGRYNARG 199

  Fly   584 IDLNRNFPDQYGTDRFNKVTEPEVAAVMNWTLSLPFVLSANLHGGSLVANYPFDDNENDFNDPFM 648
            .||||||||.:..:  ||..:||..:|.:|...:.||||.:||||:|||:||:|      |.|..
  Fly   200 FDLNRNFPDYFKQN--NKRGQPETDSVKDWISKIQFVLSGSLHGGALVASYPYD------NTPNS 256

  Fly   649 RL-----RNSSI------NGRKPNPTEDNALFKHLAGIYSNAHPTMYLGQPCELFQNEFFPDGIT 702
            ||     |:|::      ....|:.|.|:.:||||:.:|:..|..|..|..|: .....|.:|||
  Fly   257 RLLKGICRSSALCAMFQTYSAAPSLTPDDDVFKHLSLVYARNHAKMSRGVACK-SATPAFENGIT 320

  Fly   703 NGAQWYSVTGGMQDWNYVRAGCLELTIEMGCDKFPKAAELSRYWEDHREPLLQFIEQVHCGIHGF 767
            |||.||.:||||||:|||..||:|:|:|:.|.|||.|.||.:||||::..|::|:.:.|.|:.||
  Fly   321 NGAAWYPLTGGMQDYNYVWYGCMEITLEISCCKFPPAYELKKYWEDNQLSLIKFLAEAHRGVQGF 385

  Fly   768 VHSTIGTPIAGAVVRLDGANHSTYSQVFGDYWKLALPGRHNLTVLGDNYAPLRMEVEVPDVHPFE 832
            |....|.||..|.:::.|.:....:..:|::|::.|||.:.:.|..:.:||..:|..:.:.||  
  Fly   386 VFDPAGMPIERASIKIKGRDVGFQTTKYGEFWRILLPGYYKVEVFAEGFAPREVEFVIVEQHP-- 448

  Fly   833 MRMDITLMPD------------------------------DPQHW---------ASAND---FRI 855
            ..:::||.|.                              .|||:         |:::|   |..
  Fly   449 TLLNVTLQPSKRLEGIGPMGPGGVPVGGVVGPGGLYRPIPSPQHYRPPVPPYAGAASSDSGIFST 513

  Fly   856 IENVVNTRY 864
            |.|.:|:.|
  Fly   514 ISNGLNSLY 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svrNP_001284744.1 M14_CPD_I 40..334 CDD:199850
Peptidase_M14NE-CP-C_like 338..416 CDD:200604
M14_CP_N-E_like 456..759 CDD:199842 147/313 (47%)
Peptidase_M14NE-CP-C_like 763..839 CDD:200604 20/75 (27%)
CarbopepD_reg_2 1125..1202 CDD:290434
CarboxypepD_reg 1223..1301 CDD:290350
CG4678NP_001138211.1 M14_CP_N-E_like 72..377 CDD:199842 147/313 (47%)
Peptidase_M14NE-CP-C_like 381..455 CDD:200604 20/75 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440828
Domainoid 1 1.000 228 1.000 Domainoid score I664
eggNOG 1 0.900 - - E1_KOG2649
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101221at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm3347
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11532
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3496
SonicParanoid 00.000 Not matched by this tool.
87.880

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