DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment svr and Cpd

DIOPT Version :10

Sequence 1:NP_996319.1 Gene:svr / 30998 FlyBaseID:FBgn0004648 Length:1439 Species:Drosophila melanogaster
Sequence 2:NP_036968.1 Gene:Cpd / 25306 RGDID:2393 Length:1378 Species:Rattus norvegicus


Alignment Length:1480 Identity:488/1480 - (32%)
Similarity:699/1480 - (47%) Gaps:297/1480 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QQPHYASQEQL-EDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRSRNLLTPP------ 93
            |..||..:..| |.|.|......|..|::..:|.|:|||.|..|:::..      |.||      
  Rat    59 QFDHYYHEAALGEALEAAAAAGPPGLARLFSIGNSVEGRPLWVLRLTAG------LGPPPTPAAV 117

  Fly    94 --------------VKYIANMHGDETVGRQLLVYMAQYLLGNHERISD--LGQLVNSTDIYLVPT 142
                          ||.:.||||||||.||:|||:|:.|...:.| .|  |.:|:|:||:||:|:
  Rat   118 GLDAAGPLLPGRPQVKLVGNMHGDETVSRQVLVYLARELASGYRR-GDPRLVRLLNTTDVYLLPS 181

  Fly   143 MNPDGYALSQEGNC----ESLPNYVGRGNAANIDLNRDFPDRLEQSHVHQLRAQSRQPETAALVN 203
            :||||:..::||:|    ...|...||.|:...||||.|||:........|   ...||..||::
  Rat   182 LNPDGFERAREGDCGLGDSGPPGTSGRDNSRGRDLNRSFPDQFSTGEPPSL---DEVPEVRALID 243

  Fly   204 WIVSKPFVLSANFHGGAVVASYPYDNSLAHNECCEESLTPDDRVFKQLAHTYSDNHPIMRKGN-N 267
            ||....||||.|.|||:||||||:|:|..|......|.|.||.||:.||..|:.||||||.|. :
  Rat   244 WIRRNKFVLSGNLHGGSVVASYPFDDSPEHKTTGIYSKTSDDEVFRYLAKAYASNHPIMRTGEPH 308

  Fly   268 C----NDSFSGGITNGAHWYELSGGMQDFNYAFSNCFELTIELSCCKYPAASTLPQEWQRNKASL 328
            |    .::|..|||||||||::.|||||:||.::||||:|:||||||||.||.|.|||:.|:.||
  Rat   309 CPGDEEETFKDGITNGAHWYDVEGGMQDYNYVWANCFEITLELSCCKYPPASQLRQEWENNRESL 373

  Fly   329 LQLLRQAHIGIKGLVTDA-SGFPIADANVYVAGLEEKPMRTSKRGEYWRLLTPGLYSVHASAFGY 392
            :.|:.:.||||||.|.|: :|..:.:|.:.|||:... :.|.:.|::.|||.||.|::.|.:.||
  Rat   374 ITLIEKVHIGIKGFVKDSVTGSGLENATISVAGINHN-ITTGRFGDFHRLLIPGSYNLTAVSPGY 437

  Fly   393 QTSAPQQVRVTNDNQEALRLDFKLAPV-------ETNFDGNFRKVKVERSEPPQKLKKQFNGFLT 450
            .......:.|...  .|..:||.|.|.       .|........|.|....|......|   .:.
  Rat   438 MPLTINNIVVKEG--PATEIDFSLQPTVMSVVPDSTEAVTTPGTVAVPNIPPGTPSSHQ---PIQ 497

  Fly   451 PTKYEHHNFTAMESYLRAISSSYPSLTRLYSIGKSVQGRDLWVLEIFATPGSHVPGVPEFKYVAN 515
            |..:.||:|..||.:||..::.||::|||||:||||:.|:|:|:||...||.|.||.|||||:.|
  Rat   498 PKDFHHHHFPDMEIFLRRFANEYPNITRLYSLGKSVESRELYVMEISDNPGVHEPGEPEFKYIGN 562

  Fly   516 MHGNEVVGKELLLILTKYMLERYGNDDRITKLVNGTRMHFLYSMNPDGYEISIEGDRTGGVGRAN 580
            ||||||||:||||.|.:|:.:.:|.|..:|.||..||:|.:.||||||||.|.|||....|||.|
  Rat   563 MHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVRSTRIHLMPSMNPDGYEKSQEGDSISVVGRNN 627

  Fly   581 AHGIDLNRNFPDQYG--TDRFNKVTEPEVAAVMNWTLSLPFVLSANLHGGSLVANYPFDDNENDF 643
            ::..|||||||||:.  ||    .|:||..|||:|..:.||||||||||||||.|||:||||   
  Rat   628 SNNFDLNRNFPDQFVPITD----PTQPETIAVMSWVKAYPFVLSANLHGGSLVVNYPYDDNE--- 685

  Fly   644 NDPFMRLRNSSINGRKPNPTEDNALFKHLAGIYSNAHPTMYLGQPC-ELFQNEFFPDGITNGAQW 707
                   :..:...:.|    |:|:|:.:|..||..:..|:.|:|| :::.||:||.||||||.|
  Rat   686 -------QGVATYSKSP----DDAVFQQIALSYSKENSQMFQGRPCKDMYLNEYFPHGITNGASW 739

  Fly   708 YSVTGGMQDWNYVRAGCLELTIEMGCDKFPKAAELSRYWEDHREPLLQFIEQVHCGIHGFV-HST 771
            |:|.||||||||::..|.|:|||:||.|:|...||.:|||.:|..|:||::|||.|:.||| .:|
  Rat   740 YNVPGGMQDWNYLQTNCFEVTIELGCVKYPFEKELPKYWEQNRRSLIQFMKQVHQGVKGFVLDAT 804

  Fly   772 IGTPIAGAVVRLDGANHSTYSQVFGDYWKLALPGRHNLTVLGDNYAPLRMEVEVPDVHPFEMRMD 836
            .|..|..|.:.:...||...:...||||:|.:||.:.:|.....|.|:...|.|......::...
  Rat   805 DGRGILNATLSVAEINHPVTTYKAGDYWRLLVPGTYKITASARGYNPVTKNVTVRSEGAIQVNFT 869

  Fly   837 ITLMPDDPQ--------HWASANDFRIIENVVNTRYHTNPQVRARLAELENQNG----------Q 883
            :.....|..        |..|.:|         |...|:.:..|.:..|..:||          .
  Rat   870 LVRSSTDANNESKKGKGHSTSTDD---------TSDPTSKEFEALIKHLSAENGLEGFMLSSSSD 925

  Fly   884 IASFGYAD----SEF--GTIFNYLKMTS----------------------DIGEPEEHKYKLLVV 920
            :|.:.|..    |||  |.:.||..:|:                      :|.||||.|.:.  |
  Rat   926 LALYRYHSYKDLSEFLRGLVMNYPHITNLTTLGQSVEYRHIWSLEISNKPNISEPEEPKIRF--V 988

  Fly   921 SSLYDTTAPLGREILLNLIRHLVEGFKLQDTSVVELLKRSVIYFLPQ--------------TSKF 971
            :.::. .||:|.|:||.|...|...:| ::..|.:|:.|:.|..:|.              ||| 
  Rat   989 AGIHG-NAPVGTELLLALAEFLCLNYK-KNPVVTQLVDRTRIVIVPSLNPDGRERAQEKDCTSK- 1050

  Fly   972 QNVFDMYNSNTSICDPVLGDELAERILGPETDQAKDVFLQFLRSERFDLMLTFGAGNSDLNYPKG 1036
                   ..:|:.....|..:.......|||   |.:....::.:.|.|.:....|:..:.||..
  Rat  1051 -------TGHTNARGRDLDTDFTSNASQPET---KAIIENLIQKQDFSLSIALDGGSVLVTYPYD 1105

  Fly  1037 DSVLV-----KFAHRMQRTEFNYSPL-----QCPPSATRQL------HRETTERLTNMM-YRIY- 1083
            ..|..     ...|.......|:..:     .||.::...:      ..|....|.:|. |.:. 
  Rat  1106 KPVQTVENKETLKHLASLYANNHPSMHMGQPSCPNNSDENIPGGVMRGAEWHSHLGSMKDYSVTY 1170

  Fly  1084 -NLPVYTLGISCCRMPHQKKIASVWRKNIDKIKNFLALVKTGVSGLVQNDKGQPLREAYVRLLEH 1147
             :.|..|:..|||..|...::.::|.:|...:.:.|..|..||.|||::..|:|:.:|.:.|.|.
  Rat  1171 GHCPEITVYTSCCYFPSAAQLPALWAENKKSLLSMLVEVHKGVHGLVKDKTGKPISKAVIVLNEG 1235

  Fly  1148 DRIINVTKNVARFQLMLPHGLYGLEVTAPNYESQMIKVDVEDGRVTELGIIRMHPFTLIRGVVLE 1212
            .|:  .||....|.::|..|::.:...|..|:.|..:|.|.                        
  Rat  1236 IRV--HTKEGGYFHVLLAPGVHNINAIADGYQQQHSQVFVH------------------------ 1274

  Fly  1213 LPNNDNRATTSIAGVVLDESNHPVRNAKVSVVGQTQLRNFTGSMGQYRISAVPLGTITLKVEAPR 1277
                 :.|.:|:. :|.|..|                                            
  Rat  1275 -----HDAASSVV-IVFDTDN-------------------------------------------- 1289

  Fly  1278 HLEATRQMHLIQGGLATENVVFHLKVNEHVFGLPRFLFILCA----SVLIIVGVIVCVLCA---- 1334
                                        .:|||||.|.:..:    |.||:...|:..:|:    
  Rat  1290 ----------------------------RIFGLPRELVVTVSGATMSALILTACIIWCICSIKSN 1326

  Fly  1335 --QFWFYRRHRGDKPYYNFSLLPQRG--KEQFGLEDDDGGDDGETELFRS 1380
              :..|:|..:....|.:...:...|  |.....|..|..|..|..|:.|
  Rat  1327 RHKDGFHRLRQHHDEYEDEIRMMSTGSKKSLLSHEFQDETDTEEETLYSS 1376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svrNP_996319.1 M14_CPD_I 40..334 CDD:349440 143/325 (44%)
Peptidase_M14NE-CP-C_like 338..416 CDD:200604 26/78 (33%)
M14_CP_N-E_like 456..759 CDD:349431 161/305 (53%)
Peptidase_M14NE-CP-C_like 763..839 CDD:200604 22/76 (29%)
Peptidase_M14NE-CP-C_like 1124..1190 CDD:473874 21/65 (32%)
CarboxypepD_reg 1223..1301 CDD:433354 4/77 (5%)
CpdNP_036968.1 Peptidase_M14_like 86..378 CDD:472171 136/301 (45%)
Cell attachment site. /evidence=ECO:0000255 162..164 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..232 14/42 (33%)
Peptidase_M14NE-CP-C_like 383..459 CDD:200604 26/78 (33%)
M14_CPD_II 496..791 CDD:349435 162/312 (52%)
Peptidase_M14NE-CP-C_like 795..870 CDD:200604 22/74 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 875..898 5/31 (16%)
M14_CPD_III 931..1208 CDD:349464 61/291 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1039..1068 5/36 (14%)
Peptidase_M14NE-CP-C_like 1212..1286 CDD:200604 24/105 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1357..1378 6/20 (30%)

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