DRSC/TRiP Functional Genomics Resources

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Protein Alignment svr and cpd-2

DIOPT Version :10

Sequence 1:NP_996319.1 Gene:svr / 30998 FlyBaseID:FBgn0004648 Length:1439 Species:Drosophila melanogaster
Sequence 2:NP_510625.2 Gene:cpd-2 / 181684 WormBaseID:WBGene00012073 Length:492 Species:Caenorhabditis elegans


Alignment Length:404 Identity:170/404 - (42%)
Similarity:237/404 - (58%) Gaps:20/404 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   440 KLKKQFNGFLTPTKYEHHNFTAMESYLRAISSSYPSLTRLYSIGKSVQGRDLWVLEIFATPGSHV 504
            :|:.....|..|..:.|.|::.:..::..:...:|:||.:||.|:|||||:||||.:...|..|.
 Worm    42 QLRDTIGPFRDPLNFSHMNYSTLTDHIHNLHRKFPNLTHIYSAGQSVQGRELWVLVVSRYPIEHR 106

  Fly   505 PGVPEFKYVANMHGNEVVGKELLLILTKYMLERYGNDDRITKLVNGTRMHFLYSMNPDGYEISIE 569
            ..:||||||||||||||.|:..|:.|...:||.|.::..|.:||:.||:|.:.||||||||.:.|
 Worm   107 KLIPEFKYVANMHGNEVTGRVFLVSLAHTLLENYNSNLWIRQLVDSTRIHLMPSMNPDGYEHASE 171

  Fly   570 GDRTGGVGRANAHGIDLNRNFPDQYGTDRFNKVTEPEVAAVMNWTLSLPFVLSANLHGGSLVANY 634
            ||:.|..||.||:|.|||||||.::.........:||..|:||||..:||.||||||||:.:.||
 Worm   172 GDQAGVTGRQNANGKDLNRNFPSRFPNYFPTSEIQPETIAIMNWTRQIPFALSANLHGGTTLVNY 236

  Fly   635 PFDDNENDFNDPFMRLRNSSINGRKPNPTEDNALFKHLAGIYSNAHPTMY-LGQPC---ELFQNE 695
            ||||...       |.|.|..     .|:.|||||..||..|:..|..|: .|..|   :|..:.
 Worm   237 PFDDFPT-------RTRQSHY-----APSPDNALFVRLAYTYARGHERMWKKGPRCLDDDLNISV 289

  Fly   696 FFPDGITNGAQWYSVTGGMQDWNYVRAGCLELTIEMGCDKFPKAAELSRYWEDHREPLLQFIEQV 760
            ...:||.|||.||.|:||||||||:...|.|:|:||.|:|||:..:|...||:::..||:||:.:
 Worm   290 DPQNGIINGADWYIVSGGMQDWNYLNTNCFEVTVEMNCEKFPQTKKLRYLWEENKYALLKFIDLI 354

  Fly   761 HCGIHGFV-HSTIGTPIAGAVVRLDGANHSTYSQVFGDYWKLALPGRHNLTVLGDNYAPLRMEVE 824
            |..|||.| .:..|..|..|.|.:|.......|...|::|:||..|:::||....:|.|:...|.
 Worm   355 HGAIHGLVIDADTGEGIVNATVSIDERAKIVVSYGEGEFWRLANMGKYDLTFDHSDYYPVTQTVH 419

  Fly   825 V--PDVHPF-EMRM 835
            |  .|..|: |:|:
 Worm   420 VTPQDRSPYIEVRL 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svrNP_996319.1 M14_CPD_I 40..334 CDD:349440
Peptidase_M14NE-CP-C_like 338..416 CDD:200604
M14_CP_N-E_like 456..759 CDD:349431 141/306 (46%)
Peptidase_M14NE-CP-C_like 763..839 CDD:200604 25/77 (32%)
Peptidase_M14NE-CP-C_like 1124..1190 CDD:473874
CarboxypepD_reg 1223..1301 CDD:433354
cpd-2NP_510625.2 M14_CP_N-E_like 58..352 CDD:349431 140/305 (46%)
Peptidase_M14NE-CP-C_like 358..433 CDD:200604 24/74 (32%)
Blue background indicates that the domain is not in the aligned region.

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