DRSC/TRiP Functional Genomics Resources

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Protein Alignment svr and CPM

DIOPT Version :10

Sequence 1:NP_996319.1 Gene:svr / 30998 FlyBaseID:FBgn0004648 Length:1439 Species:Drosophila melanogaster
Sequence 2:NP_001400316.1 Gene:CPM / 1368 HGNCID:2311 Length:455 Species:Homo sapiens


Alignment Length:424 Identity:173/424 - (40%)
Similarity:249/424 - (58%) Gaps:45/424 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HYASQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRSRNLLTPPVKYIANMHGD 103
            :|..||.:|.....:.:.|.:...:|.:|:|::||||..|.:.|..:...:..|..||:||||||
Human    21 NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVANMHGD 85

  Fly   104 ETVGRQLLVYMAQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGYALSQEGNCESLPNY--VGRG 166
            |||||:||:::..||:.:..:..::..|:|||.|:::|:|||||:...::.:|     |  :||.
Human    86 ETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDC-----YYSIGRE 145

  Fly   167 NAANIDLNRDFPDRLEQSHVHQLRAQSRQPETAALVNWIVSKPFVLSANFHGGAVVASYPYDNSL 231
            |....||||:|||..|.::|      ||||||.|::.|:.::.||||||.||||:|||||:||.:
Human   146 NYNQYDLNRNFPDAFEYNNV------SRQPETVAVMKWLKTETFVLSANLHGGALVASYPFDNGV 204

  Fly   232 -------------AHNECCEESLTPDDRVFKQLAHTYSDNHPIMRKGNNCND--SFSGGITNGAH 281
                         |.......||||||.||:.|||||:..:|.|:||:.|.:  :|..|:|||..
Human   205 QVSLKVLVHLLNAATGALYSRSLTPDDDVFQYLAHTYASRNPNMKKGDECKNKMNFPNGVTNGYS 269

  Fly   282 WYELSGGMQDFNYAFSNCFELTIELSCCKYPAASTLPQEWQRNKASLLQLLRQAHIGIKGLVTDA 346
            ||.|.|||||:||.::.|||:|:||||||||....||..|..|||||::.::|.|:|:||.|.|.
Human   270 WYPLQGGMQDYNYIWAQCFEITLELSCCKYPREEKLPSFWNNNKASLIEYIKQVHLGVKGQVFDQ 334

  Fly   347 SGFPIADANVYVAGLEEK---PMRTSKRGEYWRLLTPGLYSVHASAFGYQTSAPQQVRV----TN 404
            :|.|:  .||.|...:.|   |.||:|.|||:.||.||.|.::.:..|:.   |...:|    .:
Human   335 NGNPL--PNVIVEVQDRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHD---PHITKVIIPEKS 394

  Fly   405 DNQEALRLDFKLAPVETNFDGNFRKVKVERSEPP 438
            .|..||:.|..|.     |.|....:.|.....|
Human   395 QNFSALKKDILLP-----FQGQLDSIPVSNPSCP 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svrNP_996319.1 M14_CPD_I 40..334 CDD:349440 136/310 (44%)
Peptidase_M14NE-CP-C_like 338..416 CDD:200604 30/84 (36%)
M14_CP_N-E_like 456..759 CDD:349431
Peptidase_M14NE-CP-C_like 763..839 CDD:200604
Peptidase_M14NE-CP-C_like 1124..1190 CDD:473874
CarboxypepD_reg 1223..1301 CDD:433354
CPMNP_001400316.1 M14_CPM 22..322 CDD:349438 136/310 (44%)
Peptidase_M14NE-CP-C_like 326..406 CDD:200604 30/84 (36%)
Blue background indicates that the domain is not in the aligned region.

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