DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment svr and cpd

DIOPT Version :9

Sequence 1:NP_001284744.1 Gene:svr / 30998 FlyBaseID:FBgn0004648 Length:1439 Species:Drosophila melanogaster
Sequence 2:XP_031752525.1 Gene:cpd / 100135269 XenbaseID:XB-GENE-1013552 Length:1339 Species:Xenopus tropicalis


Alignment Length:1511 Identity:495/1511 - (32%)
Similarity:708/1511 - (46%) Gaps:327/1511 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AVLAMGVPHCRGYTIKEDESFLQ----QPHYASQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRN 74
            |:|.:|. .|..|.....:..|.    ..||...|:|..|...|::|:|..|.:..||||::||.
 Frog    10 ALLLLGT-LCPVYPFATKKDMLDYSEAHDHYYDYEELTGLLRALQQAHPELASLGSLGRSVQGRE 73

  Fly    75 LLALQISRNTRSRNLLTPPVKYIANMHGDETVGRQLLVYMAQYLLGNHERISDLGQLVNSTDIYL 139
            |..::::....:.....|..||:.||||||||.||:|.|:.||||..:.|...:..|:||||||:
 Frog    74 LWYMRLTVEPDAVPPERPKFKYVGNMHGDETVSRQVLTYLTQYLLAQYGREERITHLLNSTDIYI 138

  Fly   140 VPTMNPDGYALSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSHVHQLRAQSRQPETA----- 199
            ||::||||:..||||:|..  ...||.||.|.||||.|||        |....|..|:.|     
 Frog   139 VPSLNPDGFEKSQEGDCRG--GNGGRNNANNKDLNRSFPD--------QYSPDSPPPDAAVVPEV 193

  Fly   200 -ALVNWIVSKPFVLSANFHGGAVVASYPYDNSLAHNECCEESLTPDDRVFKQLAHTYSDNHPIMR 263
             |::.|:.:..||||.|.|||:||||||||:|..|......|.:.||:|||.||..|::|||||:
 Frog   194 TAMMQWLSNNSFVLSGNLHGGSVVASYPYDDSRQHIASGLYSRSSDDKVFKYLAKAYAENHPIMK 258

  Fly   264 KGN-NC---NDSFSGGITNGAHWYELSGGMQDFNYAFSNCFELTIELSCCKYPAASTLPQEWQRN 324
            .|. .|   ::.|..||||||.||:::|||||:||.:.||||:|.||||||||.||.|.:||:.|
 Frog   259 TGQPECEGEDEVFQDGITNGAEWYDVAGGMQDYNYIWGNCFEVTFELSCCKYPPASKLAEEWEYN 323

  Fly   325 KASLLQLLRQAHIGIKGLVTDA-SGFPIADANVYVAGLEEKPMRTSKRGEYWRLLTPGLYSVHAS 388
            :.||:..:...|||.||.|||: :|..|.:|.:.|.|::.. :.|.|.|.:.|||.||||::.||
 Frog   324 RESLITFIEMVHIGAKGFVTDSVTGKGIENAIISVEGIDHN-ITTGKLGNFQRLLAPGLYNITAS 387

  Fly   389 AFGYQTSAPQQVRVTNDNQEALRLDFKLAPVETNFDGNFRK--------------VKVERSEPPQ 439
            ..||.......|.|...  .|..|:|.|.|.....|.|.:.              ||.:.:..|:
 Frog   388 GTGYLPETLVDVEVKQG--PATLLEFSLHPTVIIPDSNIKPETTTGVIATTEELGVKTQSTTTPR 450

  Fly   440 KLKKQFNGFLTPTKYEHHNFTAMESYLRAISSSYPSLTRLYSIGKSVQGRDLWVLEIFATPGSHV 504
            ..       :.|..:.||.:|.||.:|....|.|||:||.||:||||:.:||:|:||...||.|.
 Frog   451 IA-------IQPQDFRHHRYTDMEIFLMKFHSEYPSITRRYSVGKSVEQKDLYVMEISDNPGIHE 508

  Fly   505 PGVPEFKYVANMHGNEVVGKELLLILTKYMLERYGNDDRITKLVNGTRMHFLYSMNPDGYEISIE 569
            ||.|||||:.|||||||||:||||.|.:|:.:.||.|..:|.||..||:|.:.||||||||.:.|
 Frog   509 PGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNYGIDPEVTYLVQNTRIHIMPSMNPDGYEKAEE 573

  Fly   570 GDRTGGVGRANAHGIDLNRNFPDQYGTDRFNKVT---EPEVAAVMNWTLSLPFVLSANLHGGSLV 631
            ||:.|.|||.|::..|||||||||     |.::|   :||..|||.|..:.||||||||||||||
 Frog   574 GDKDGLVGRNNSNHFDLNRNFPDQ-----FFQITDPPQPETLAVMTWLKTYPFVLSANLHGGSLV 633

  Fly   632 ANYPFDDNENDFNDPFMRLRNSSINGRKPNPTEDNALFKHLAGIYSNAHPTMYLGQPC-ELFQNE 695
            .||||||:|          :..|...:.|    |:.:|:|||..||..:..||.|.|| |::.||
 Frog   634 VNYPFDDDE----------KGLSTYSKSP----DDPVFQHLALSYSKENNKMYEGFPCKEMYPNE 684

  Fly   696 FFPDGITNGAQWYSVTGGMQDWNYVRAGCLELTIEMGCDKFPKAAELSRYWEDHREPLLQFIEQV 760
            .||.||||||.||:|.||||||||:...|.|:|||:||.|:|.|.:|..|||.:|..:||||:||
 Frog   685 NFPQGITNGANWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPMAEKLPAYWESNRRSMLQFIKQV 749

  Fly   761 HCGIHGFV-HSTIGTPIAGAVVRLDGANHSTYSQVFGDYWKLALPGRHNLTVLGDNYAPLRMEVE 824
            |.||.||: .:|.|..|..|.:.:.|.||...|...||:|:|.:||.:.:|.....|.|:...|.
 Frog   750 HIGIKGFILDATDGRGILNATISVAGINHMVTSYKDGDFWRLLVPGAYKVTASAKGYGPVTKNVN 814

  Fly   825 V----------------PDVH------PFEMRMDITLMPDDPQHWASANDFRIIENVVNTRYHTN 867
            |                .|.|      ||....:|    .||                ||:    
 Frog   815 VTEGEAVLVNFTLVRLGSDFHKEDKGKPFTTEAEI----PDP----------------NTK---- 855

  Fly   868 PQVRARLAELENQN----------GQIASFGYAD----SEF--GTIFNYLKMT--SDIGEPEEHK 914
             :....:.:|..:|          |.|..|.|..    |||  |...||..:|  :.:|:..|.:
 Frog   856 -EFETLIKDLSAENGLEHFLMSTLGDIDRFRYRTYKDLSEFLHGLNLNYPHITNRTSLGQSVEFR 919

  Fly   915 Y------------------KLLVVSSLYDTTAPLGREILLNLIRHLVEGFKLQDTSVVELLKRSV 961
            :                  |:..|:.::. .||:|.|:||.....|...:| :..::.:|:.|:.
 Frog   920 HIWSLEISNKPNTSEPSEPKIRFVAGVHG-NAPVGTELLLTFAEFLCLNYK-KSNAITKLIDRTR 982

  Fly   962 IYFLPQTS----------KFQNVFDMYNSNTSICDPVLGDELAERILGPETDQAKD---VFLQFL 1013
            |..:|..:          :..:.....|:|....|    .:......||..::.|:   :....:
 Frog   983 IVIVPMVNPDGRERAKEKECTSTIGQNNANGKDLD----SDFISNSSGPVGEREKETNAIIDGLI 1043

  Fly  1014 RSERFDLMLTFGAGNSDLNYPKGDSVLVKFAHRMQRTE---------FNYSPL------QCPPSA 1063
            ..:.|.|.:....|:..:.||..:.|     |.::..:         .|..||      .||..:
 Frog  1044 MKQDFTLSVVLDGGSLLVTYPYDNPV-----HTVENKDTLKYLASVYANNHPLIHIGHPGCPNKS 1103

  Fly  1064 TRQL------------HRETTERLTNMMYRIYNLPVYTLGISCCRMPHQKKIASVWRKNIDKIKN 1116
            ...:            |:.:.:..:....:...:.|||   .||..|...::.::|..|...:.:
 Frog  1104 DENIPGGVICGAEWRGHQGSMKDFSVTHGQCPEITVYT---GCCLFPSSSQLHALWEDNKKALLS 1165

  Fly  1117 FLALVKTGVSGLVQNDKGQPLREAYVRLLEHDRIINVTKNVARFQLMLPHGLYGLEVTAPNYESQ 1181
            .|..|..||.|:|:::.|:|:.:|  .::.:|.:...||....|.::|..|.:.:...|..|:.|
 Frog  1166 MLVEVHKGVHGIVKDETGKPVPKA--GIIINDGVKVYTKEGGFFHVLLAPGFHNINAIAEGYQKQ 1228

  Fly  1182 MIKVDVEDGRVTELGIIRMHPFTLIRGVVLELPNNDNRATTSIAGVVLDESNHPVRNAKVSVVGQ 1246
            ..:|.|.....:.:.||.               |.|||                           
 Frog  1229 HTQVLVRHDAASPIEIIF---------------NMDNR--------------------------- 1251

  Fly  1247 TQLRNFTGSMGQYRISAVPLGTITLKVEAPRHLEATRQMHLIQGGLATENVVFHLKVNEHVFGLP 1311
                                                                        :||||
 Frog  1252 ------------------------------------------------------------IFGLP 1256

  Fly  1312 RFLFILCA----SVLIIVGVIVCVLCA------QFWFYRRHRGDKPYYNFSLLPQRGKEQFGLED 1366
            |.|.:..|    |.|::...|:..:|:      :..|:|..:.:..|.:...|...|.::..|.:
 Frog  1257 RELVVTVAGATMSALLLTACIIWCVCSIKSNRHKDGFHRLRQNNDEYEDEIRLMSTGSKKSLLSN 1321

  Fly  1367 D--DGGDDGETELFRS 1380
            |  |..|..|..|:.|
 Frog  1322 DFQDETDTEEETLYTS 1337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svrNP_001284744.1 M14_CPD_I 40..334 CDD:199850 142/303 (47%)
Peptidase_M14NE-CP-C_like 338..416 CDD:200604 30/78 (38%)
M14_CP_N-E_like 456..759 CDD:199842 166/306 (54%)
Peptidase_M14NE-CP-C_like 763..839 CDD:200604 28/98 (29%)
CarbopepD_reg_2 1125..1202 CDD:290434 19/76 (25%)
CarboxypepD_reg 1223..1301 CDD:290350 0/77 (0%)
cpdXP_031752525.1 M14_CPD_I 39..333 CDD:349440 142/303 (47%)
Peptidase_M14NE-CP-C_like 337..413 CDD:200604 30/78 (38%)
M14_CPD_II 453..748 CDD:349435 167/313 (53%)
Peptidase_M14NE-CP-C_like 752..827 CDD:200604 23/74 (31%)
M14_CPD_III 886..1169 CDD:349464 52/296 (18%)
Peptidase_M14NE-CP-C_like 1173..1248 CDD:200604 20/91 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 312 1.000 Domainoid score I1296
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 723 1.000 Inparanoid score I620
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101221at2759
OrthoFinder 1 1.000 - - FOG0008218
OrthoInspector 1 1.000 - - oto103592
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3326
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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