DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17896 and Ssadh

DIOPT Version :9

Sequence 1:NP_569845.2 Gene:CG17896 / 30995 FlyBaseID:FBgn0023537 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster


Alignment Length:505 Identity:138/505 - (27%)
Similarity:243/505 - (48%) Gaps:25/505 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLVRLIGAEARHLAKRSYSSAAPTTKLFIDGKFVE-SKTNEWIDVHDPATNQVVTRVPKATQAE 64
            :||.|:.|           .||....|..:||.:|: |......:|.:||...|:.:||..|.|:
  Fly    15 LSLCRMRG-----------FSALVQDKALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVAD 68

  Fly    65 MQAALESNKKAFRS--WSNQSILTRQQVMFKLQALIKENMGELAKNITKEQGKTLADAEGDVLRG 127
            .|.|:::.|:|:.|  |.:.:...|..::.|...||:::..|:|:.:|.|.||.:.:::|:|..|
  Fly    69 AQKAIDAAKQAYESKEWRSLTAKDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYG 133

  Fly   128 LQVVEHCCSIPSLQMGETVANVARDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVAITTGNTM 192
            ...||..........||.|.:.:.:.:...:..|:||.|.:.|:|||..:.......|:..|.|:
  Fly   134 NAFVEWFAEEARRIYGEIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTV 198

  Fly   193 LLKPSERVPGATMLLMELLNEAGCPPGVVNVIHGQHDAV--NFICDAPEIKAVSFVGSDQAGKYI 255
            ::||||..|...:.:.:|..:||.|.||:||:.....|.  :..|.:|:::.:||.||.:.||.:
  Fly   199 VVKPSEDTPLTALAVAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLL 263

  Fly   256 YERAGKNGKRVQSNMGAKNHGIILGDANKENTLNQLAGAAFGAAGQRCMALSTAVFVGDA--QAW 318
            :..:....||:...:|.....|:...|:.|..::....:.|...||.|:: :...||.|:  ..:
  Fly   264 FRNSADGIKRICLELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVS-ANRFFVQDSVYDKF 327

  Fly   319 IPDLVERAQKLKVNAGHVPGTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKITVPGYEDGY 383
            :..|.:|.:.||:..|......:||:|:.....:::..:|....:.|.:||.|:.:...|   ..
  Fly   328 VGQLKKRVEALKIGDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKG---SL 389

  Fly   384 FVGPTILSDVTPSMKCYTEEIFGPVLVILKADTLDDAIGIVNANPYGNGTAVFTTNGAAARKFVN 448
            |..|||::||.||.:.|:||:||||:.|::....::|:...|....|.....::.|.....:...
  Fly   390 FYAPTIVTDVPPSAQLYSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAK 454

  Fly   449 EIDAGQVGVNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTV 498
            .::.|.||||..| :......|.|.:.|..|...  .|.||..|...|.:
  Fly   455 RLEVGMVGVNEGI-ISAAEAPFGGVKESGVGREG--SKHGIDDYVDIKYI 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17896NP_569845.2 ALDH_F6_MMSDH 26..502 CDD:143404 132/480 (28%)
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 127/460 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454131
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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