DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17896 and CG6661

DIOPT Version :9

Sequence 1:NP_569845.2 Gene:CG17896 / 30995 FlyBaseID:FBgn0023537 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_648686.3 Gene:CG6661 / 39556 FlyBaseID:FBgn0036403 Length:581 Species:Drosophila melanogaster


Alignment Length:499 Identity:118/499 - (23%)
Similarity:196/499 - (39%) Gaps:102/499 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 HDPATNQVVTRVPKATQAEMQAALESNKKAFRSWSNQSILTRQQVMFKLQALIKENMGELAKNIT 110
            |...||  :..|..|.:.:::||::|...|..:||...|..|..:..:...:|:|:...|...:.
  Fly   106 HHLQTN--LAHVYYANRKQIEAAIKSALSAQGTWSLVPIAQRLAIWRRAATIIEEDELRLRVFLM 168

  Fly   111 KEQGKTLADAEGDVLRGL-------QVVEHCCSIPSLQMGETVANVARDMDTYSL--VLPL-GVT 165
            ....||..||..|:.|.|       ..:||        :.|....:..||:.:..  :.|: |..
  Fly   169 MTLSKTADDATRDIRRLLTSLRANADYLEH--------LSELRFEIQGDMNVFPSFHLRPMDGFV 225

  Fly   166 AGVAPFNFPAM-IPLWMFPVAITTGNTMLLKPSERVPGATMLLMELLNEAGCPPGVVNVIHGQH- 228
            |.:|||...|: ..|.:.|..:  |||:|..||..|...:.|:.....|||.|.||:|.:.... 
  Fly   226 AALAPFESVALSSSLALCPALM--GNTVLWNPSLEVAPVSYLIFRAFQEAGLPSGVINFVPANER 288

  Fly   229 -------DAVNFI-----CDAPEIKAVSFVGSDQAGKYIYERAGKNGKRVQSNMGAKNHGIILGD 281
                   |||:|.     ..|...:.|..:.||:..:||.      ..|:.:....:|...:...
  Fly   289 LFLDTITDAVHFAGLNTQASAAFYRHVHKLVSDRMERYIC------FPRLVAECPGQNFHFVHAS 347

  Fly   282 ANKENTLNQLAGAAFGAAGQRCMALSTAVFVGDAQAWIP---------DLVERAQKLKVNAGHVP 337
            |..|:.::....||||.|||...:||        :.::|         :|||..::|.:......
  Fly   348 AKVESVVSATVQAAFGFAGQYANSLS--------RMYVPSSMWPRLREELVEATEQLTIGDPIES 404

  Fly   338 GTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKITVPGYED--GYFVGPTI--LSDVTPSMK 398
            .||:|.::.....:|:..|::.  .:..:.:..|      ..:|  |.||.|||  :||....:.
  Fly   405 ETDIGAMVHINDFRRMQKLLQR--TKNMEQLCGG------SCDDSTGRFVDPTIVRVSDPLDPLL 461

  Fly   399 CYTEEIFGPVL--VILKADTLDDAIGI-VNANPYGNGTAVFTTNG------------AAARKFVN 448
            |  |...||.|  .:...|:..:|:.: .|.:.|....::|.:..            :|:..:||
  Fly   462 C--EPCCGPFLPVFVYSDDSFSEALKLAANQSRYALSGSIFASQDEVILHCLNQLRMSASNLYVN 524

  Fly   449 EIDAGQVGVNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFY 492
            |...|......|         |.|.|.|...|     |.|..::
  Fly   525 ERCTGSTYGLTP---------FGGNRLSGTND-----KSGSAYF 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17896NP_569845.2 ALDH_F6_MMSDH 26..502 CDD:143404 118/499 (24%)
CG6661NP_648686.3 ALDH-SF 68..567 CDD:299846 118/499 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454120
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.