DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3156 and ABCB13

DIOPT Version :9

Sequence 1:NP_569844.2 Gene:CG3156 / 30994 FlyBaseID:FBgn0023536 Length:692 Species:Drosophila melanogaster
Sequence 2:NP_174115.1 Gene:ABCB13 / 839687 AraportID:AT1G27940 Length:1245 Species:Arabidopsis thaliana


Alignment Length:585 Identity:202/585 - (34%)
Similarity:325/585 - (55%) Gaps:43/585 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 VLTAGIGCLVVSSAITMSVPLFLGKVIDVVFNKSGMDSAAMAKLGEYSVLLFGIFVLGGFANFAR 186
            :|..|:|..:..:.:.:.. :|.||::|.:.|.|....|..:::.:.::.|    |..|..||..
plant    47 MLLGGLGACIHGATLPLFF-VFFGKMLDSLGNLSTDPKAISSRVSQNALYL----VYLGLVNFVS 106

  Fly   187 ----VHLFGNAALRIVRSLRSRLYRSMLMQEVGWFDTKG-TGELINRLSNDTLMVGTSLSQNVSD 246
                |..:.....|....||....:|:|.:::.:|||:. ...||..:|:|.::|..::......
plant   107 AWIGVSCWMQTGERQTARLRINYLKSILAKDITFFDTEARDSNLIFHISSDAILVQDAIGDKTDH 171

  Fly   247 GLRSVAMIGVGTGMMIYTSPQLAAVSALVVPAMA----GMAIVYGRYVRRITKVELDKYAEIMKF 307
            .||.::....|..:...:..||..::..|||.:|    |.|||    :..|::.....||:..|.
plant   172 VLRYLSQFIAGFVIGFLSVWQLTLLTLGVVPLIAIAGGGYAIV----MSTISEKSETAYADAGKV 232

  Fly   308 AEERFGNVKTVKTFCREQQEVAAFDGKLDEALQIGYKETRARAIFFGLTG---FCGNFIIISVLY 369
            |||....|:||..|..|::.|.::...|.:||::|.:...|:.:..|||.   ||...::   |:
plant   233 AEEVMSQVRTVYAFVGEEKAVKSYSNSLKKALKLGKRSGLAKGLGVGLTYSLLFCAWALL---LW 294

  Fly   370 YGGTLVLQDSLTIGALTAF-----MLYAGYVAISMNGLSNFYSQLNKGIGASERIWEIL---DRE 426
            | .:|:::...|.|| .||     ::::|:   ::...:...|.:.||..|:..|:.::   :.|
plant   295 Y-ASLLVRHGKTNGA-KAFTTILNVIFSGF---ALGQAAPSLSAIAKGRVAAANIFRMIGNNNSE 354

  Fly   427 CSIPIDKGVVPLEKPVGEVGFQNVFFTFPTRPESAVLTDFSLNLMPGTTTAVVGRSGSGKTTIAL 491
            .|..:|:|.. |:...|.:.||.|.|.:|:|| :.|..:.|..:..|.|.|.||.|||||:||..
plant   355 SSQRLDEGTT-LQNVAGRIEFQKVSFAYPSRP-NMVFENLSFTIRSGKTFAFVGPSGSGKSTIIS 417

  Fly   492 LMLRLYDPQGGTVHLDGIDLRTVNPQWLRNNIGAVSQEPVLFSCSIRENILYGANPGETPSPERL 556
            ::.|.|:|..|.:.|||.|::::..:|.|..:|.|||||.||:.:|..|||.|.   |..:.:::
plant   418 MVQRFYEPNSGEILLDGNDIKSLKLKWFREQLGLVSQEPALFATTIASNILLGK---ENANMDQI 479

  Fly   557 QQVIEDANVSQFTDQLPDGLDTLVGQRGMMLSGGQKQRVAIARALIKNPAILILDEATSALDAVS 621
            .:..:.||...|...||:|.:|.||:.|..||||||||:|||||:::||.||:||||||||||.|
plant   480 IEAAKAANADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAES 544

  Fly   622 ENLVQNALDNLIQGRTVLTIAHRLSTIRNADQIAVLSDGKIVEQGSYNELMGIQEGVFRELVASQ 686
            |.:||.||||:::.||.:.:|||||||||.|:|.||.||::.|.||::||| ::.|.:..||..|
plant   545 EKIVQQALDNVMEKRTTIVVAHRLSTIRNVDKIVVLRDGQVRETGSHSELM-LRGGDYATLVNCQ 608

  Fly   687  686
            plant   609  608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3156NP_569844.2 MdlB 106..687 CDD:224055 202/585 (35%)
ABC_membrane 127..395 CDD:279056 72/284 (25%)
ABC_MTABC3_MDL1_MDL2 447..686 CDD:213216 116/238 (49%)
ABCB13NP_174115.1 PTZ00265 54..1241 CDD:240339 199/578 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 82 1.000 Domainoid score I2913
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100059
Panther 1 1.100 - - O PTHR24221
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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